RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PRR33A8MZF0 331 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 TBPP20226 339 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 ZNF93P35789 620 aaPredicted RBP15.03■□□□□ -0
SPIDR-227ENST00000541342 OR5AS1Q8N127 324 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 TERB2Q8NHR7 220 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 OR51E1Q8TCB6 317 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 NUDT16L1Q9BRJ7 211 aaKnown RBP15.03■□□□□ -0
SPIDR-227ENST00000541342 OR5AC2Q9NZP5 309 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 NDRG3Q9UGV2 375 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 CFAP47Q6ZTR5 3102 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 ZNF292O60281 2723 aa15.03■□□□□ -0
SPIDR-227ENST00000541342 IFNA6P05013 189 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 ABOP16442 354 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 NPY4RP50391 375 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 TMEM50BP56557 158 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 MYO7BQ6PIF6 2116 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 GGNQ86UU5 652 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 ZNF385AQ96PM9 386 aaKnown RBP15.02■□□□□ -0
SPIDR-227ENST00000541342 ACKR4Q9NPB9 350 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 GPR132Q9UNW8 380 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 CARHSP1Q9Y2V2 147 aaKnown RBP15.02■□□□□ -0
SPIDR-227ENST00000541342 RTTNQ86VV8 2226 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 CEACAM18A8MTB9 384 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 TPT1P13693 172 aaKnown RBP15.02■□□□□ -0
SPIDR-227ENST00000541342 PI3P19957 117 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 ITGA3P26006 1051 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 CX3CR1P49238 355 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 GSK3AP49840 483 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 NAAAQ02083 359 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 TGIF1Q15583 401 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 SGCAQ16586 387 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 TMEM128Q5BJH2 165 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 NKAPLQ5M9Q1 402 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 WIPI1Q5MNZ9 446 aaPredicted RBP15.02■□□□□ -0
SPIDR-227ENST00000541342 IL22RA1Q8N6P7 574 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 PRSS33Q8NF86 280 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 OR5D14Q8NGL3 314 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 HES7Q9BYE0 225 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 TMEM231Q9H6L2 316 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 ZNF319Q9P2F9 582 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 LHFPL6Q9Y693 200 aa15.02■□□□□ -0
SPIDR-227ENST00000541342 EIF1BO60739 113 aaKnown RBP15.02□□□□□ -0.01
SPIDR-227ENST00000541342 QDPRP09417 244 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 OR3A4PP47883 348 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 GABREP78334 506 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 ATP1A1-AS1Q5TC04 95 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 CLEC18BQ6UXF7 455 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 FAM86C1Q9NVL1 165 aa15.02□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF629Q9UEG4 869 aaPredicted RBP15.02□□□□□ -0.01
SPIDR-227ENST00000541342 PCP4L1A6NKN8 68 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF726A6NNF4 738 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 CSNK2A1P68400 391 aaPredicted RBP15.01□□□□□ -0.01
SPIDR-227ENST00000541342 ANKRD55Q3KP44 614 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 PHYHD1Q5SRE7 291 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 ABHD17BQ5VST6 288 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 SEC61A2Q9H9S3 476 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 TRAPPC6AO75865 159 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 GLIPR1L1Q6UWM5 242 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 RTBDNQ9BSG5 229 aaPredicted RBP15.01□□□□□ -0.01
SPIDR-227ENST00000541342 BANF2Q9H503 90 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 PLA2G3Q9NZ20 509 aa15.01□□□□□ -0.01
SPIDR-227ENST00000541342 LRP3O75074 770 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 SLC2A1P11166 492 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 LYL1P12980 280 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 NPBWR1P48145 328 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 SUCLG1P53597 346 aaKnown RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 SLC9A3R2Q15599 337 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 VAX1Q5SQQ9 334 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 DHRS7BQ6IAN0 325 aaPredicted RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 ZNF101Q8IZC7 436 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 OR10H5Q8NGA6 315 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 OR9K2Q8NGE7 335 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 NCOA6Q14686 2063 aaPredicted RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 HIST1H1DP16402 221 aaKnown RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 GDF1P27539 372 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 LINC00696Q6ZRV3 163 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 TMEM200AQ86VY9 491 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 DTX1Q86Y01 620 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 ZIC4Q8N9L1 334 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 RNF141Q8WVD5 230 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 OR10C1Q96KK4 312 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 CDC14BO60729 498 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 RFC3P40938 356 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 CLDN15P56746 228 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 TAS2R31P59538 309 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 AIMP2Q13155 320 aaKnown RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 HAGHLQ6PII5 290 aaPredicted RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 OR51F2Q8NH61 342 aa15□□□□□ -0.01
SPIDR-227ENST00000541342 NAA11Q9BSU3 229 aaPredicted RBP15□□□□□ -0.01
SPIDR-227ENST00000541342 GJE1A6NN92 205 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 F8W036 122 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 H7C2Y5 167 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 SCGNO76038 276 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 MPIG6BO95866 241 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 CTAG1AP78358 180 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 BLOC1S1P78537 153 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 DMRTC1Q5HYR2 192 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 AADACL3Q5VUY0 350 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 PGAP1Q75T13 922 aa14.99□□□□□ -0.01
SPIDR-227ENST00000541342 PEG10Q86TG7 708 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms