RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CR1P17927 2039 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.184e-8■■■■■ 30.4
NUP54-207ENST00000508583 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 HIVEP2P31629 2446 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 TRAV20A0A0B4J274 112 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 PQLC2LA1A4F0 135 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 LGALS8O00214 317 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 CDIPTO14735 213 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 PLPP2O43688 288 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 FOXH1O75593 365 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 ALX3O95076 343 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 IGHV2-5P01817 119 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 IGHV4-31P0DP07 118 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 RPS2P15880 293 aaKnown RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 HNF1AP20823 631 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 GATA3P23771 443 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 THBS2P35442 1172 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 HAAOP46952 286 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 RBP2P50120 134 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 NPY4RP50391 375 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 GTF2A1P52655 376 aaPredicted RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 ATP1B3P54709 279 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 GPR50Q13585 617 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 ZMYND11Q15326 602 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 MED22Q15528 200 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 SMIM21Q3B7S5 101 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 ESCO2Q56NI9 601 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 SPRNQ5BIV9 151 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 DMKNQ6E0U4 476 aaPredicted RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 HAGHLQ6PII5 290 aaPredicted RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 FIP1L1Q6UN15 594 aaKnown RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 WDR82Q6UXN9 313 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 SLC36A1Q7Z2H8 476 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 GLCCI1Q86VQ1 547 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 Q8IYB0 196 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 MS4A15Q8N5U1 240 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 PARP16Q8N5Y8 322 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 SCCPDHQ8NBX0 429 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 MAPK1IP1LQ8NDC0 245 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 OR8B3Q8NGG8 313 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 LRRC29Q8WV35 223 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 GHSRQ92847 366 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 UFD1Q92890 307 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 FGGYQ96C11 551 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 C1orf159Q96HA4 380 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 OR8B2Q96RD0 313 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 PKIBQ9C010 78 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 OR51I2Q9H344 312 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 ZCCHC4Q9H5U6 513 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 PATZ1Q9HBE1 687 aaKnown RBP7.68□□□□□ -1.18
NUP54-207ENST00000508583 DNAJB11Q9UBS4 358 aa7.68□□□□□ -1.18
NUP54-207ENST00000508583 FAM230AA0A1W2PPH8 454 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 NKX6-3A6NJ46 265 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 CEACAM18A8MTB9 384 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 A8MV72 311 aaPredicted RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 SRRM5B3KS81 715 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 E9PI62 339 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 H3BSH0 61 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 GPR37O15354 613 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 SULT1B1O43704 296 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 LHBP01229 141 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 MT-ND2P03891 347 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 MSMBP08118 114 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 ATF1P18846 271 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 CELP19835 753 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 RAB3AP20336 220 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 GLRA1P23415 457 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 PSMA1P25786 263 aaKnown RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 PMELP40967 661 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 DVL1P1P54792 670 aaPredicted RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 MTCP1P56278 107 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 IL24Q13007 206 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 TRAM1Q15629 374 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 TBCEQ15813 527 aaPredicted RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 C11orf91Q3C1V1 193 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 Q499Y3 187 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 TEX36Q5VZQ5 186 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 WDR86Q86TI4 376 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 FAM90A1Q86YD7 464 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 BOLLQ8N9W6 283 aaKnown RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 ZNF485Q8NCK3 441 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 AQP3Q92482 292 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 FCGR1BQ92637 280 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 RPL3LQ92901 407 aaKnown RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 TMEM106AQ96A25 262 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 TMIGD2Q96BF3 282 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 ADAT3Q96EY9 351 aaPredicted RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 NEIL1Q96FI4 390 aaPredicted RBP7.67□□□□□ -1.18
NUP54-207ENST00000508583 OPALINQ96PE5 141 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 SMR3AQ99954 134 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 DNTTIP1Q9H147 329 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 RHOFQ9HBH0 211 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 ISYNA1Q9NPH2 558 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 LPAR3Q9UBY5 353 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 OR5V1Q9UGF6 321 aa7.67□□□□□ -1.18
NUP54-207ENST00000508583 TLN2Q9Y4G6 2542 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 PPIAL4CA0A0B4J2A2 164 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 A0A0G2JMP0 313 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 A0A0X1KG70 313 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms