RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 IL5RAQ01344 420 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CDC20Q12834 499 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 STX4Q12846 297 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 DYNC1I2Q13409 638 aaKnown RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 EIF4EBP2Q13542 120 aaPredicted RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 GPR176Q14439 515 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CDNFQ49AH0 187 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 LIN9Q5TKA1 542 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 ZNF880Q6PDB4 577 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 SSX6Q7RTT6 188 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 NECAP1Q8NC96 275 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 NT5CQ8TCD5 201 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 FAM19A4Q96LR4 140 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 OR2M4Q96R27 311 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CIB1Q99828 191 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 FRMD8P1Q9BZ68 369 aaPredicted RBP1.93□□□□□ -2.1
VCL-203ENST00000461383 TBL1XR1Q9BZK7 514 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CHRNA10Q9GZZ6 450 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 RAB1BQ9H0U4 201 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 SLC38A1Q9H2H9 487 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 ZNF302Q9NR11 478 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 STMN3Q9NZ72 180 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 VAX2Q9UIW0 290 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 AP3M1Q9Y2T2 418 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 PPIL1Q9Y3C6 166 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 CBY1Q9Y3M2 126 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 WIF1Q9Y5W5 379 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 NOTCH2Q04721 2471 aa1.93□□□□□ -2.1
VCL-203ENST00000461383 TICRRQ7Z2Z1 1910 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 A0A0G2JMP0 313 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 A0A0X1KG70 313 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 A0A1B0GW15 77 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 K7EN84 100 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 M0R1B8 84 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 ZNF593O00488 134 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 RRP8O43159 456 aaKnown RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 NDUFS5O43920 106 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 VAPBO95292 243 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 MPZL1O95297 269 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 GIMD1P0DJR0 217 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 CCL2P13500 99 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 GPR4P46093 362 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 HADHBP55084 474 aaKnown RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 OR12D2P58182 307 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 TAS2R43P59537 309 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 GRB2P62993 217 aaKnown RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 TRDNQ13061 729 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 MAD2L1BPQ15013 274 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 PMVKQ15126 192 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 ANGPT1Q15389 498 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 TTC32Q5I0X7 151 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 IDNKQ5T6J7 187 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 SYT6Q5T7P8 510 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 RESP18Q5W5W9 173 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 KDM4DQ6B0I6 523 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 EPGNQ6UW88 154 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 UGT2A3Q6UWM9 527 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 NELFCDQ8IXH7 590 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 H1FOOQ8IZA3 346 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 ATPAF2Q8N5M1 289 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 LRRC52Q8N7C0 313 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 OR5M1Q8NGP8 315 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 LGALS14Q8TCE9 139 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 RTN4IP1Q8WWV3 396 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 HGDQ93099 445 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 CCDC124Q96CT7 223 aaKnown RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 ADTRPQ96IZ2 230 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 GPR82Q96P67 336 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 VAT1Q99536 393 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 PDCD1LG2Q9BQ51 273 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 C20orf144Q9BQM9 153 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 TIMM29Q9BSF4 260 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 TMED9Q9BVK6 235 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 CSNK1G1Q9HCP0 422 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 TAS2R5Q9NYW4 299 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 ZNF835Q9Y2P0 537 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 JCADQ9P266 1359 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 PLA2R1Q13018 1463 aa1.92□□□□□ -2.1
VCL-203ENST00000461383 KIF26AQ9ULI4 1882 aaPredicted RBP1.92□□□□□ -2.1
VCL-203ENST00000461383 TNS2Q63HR2 1409 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 SCN4AP35499 1836 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 TRIP11Q15643 1979 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 IGHV1-3A0A0C4DH29 117 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 K7ERQ8 282 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 YKT6O15498 198 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 RCBTB2O95199 551 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 WISP3O95389 354 aaPredicted RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 MAS1P04201 325 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 HLA-GP17693 338 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 PAX6P26367 422 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 IL3RAP26951 378 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 UBE2KP61086 200 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 RPL10AP62906 217 aaKnown RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 ZNF816Q0VGE8 651 aaPredicted RBP1.91□□□□□ -2.1
VCL-203ENST00000461383 KLHL12Q53G59 568 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 LCE3AQ5TA76 89 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 FAHD1Q6P587 224 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 PDPNQ86YL7 162 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 SYCE1Q8N0S2 351 aa1.91□□□□□ -2.1
VCL-203ENST00000461383 ORMDL3Q8N138 153 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms