RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 GPER1Q99527 375 aa9.65□□□□□ -0.86
LINC00539-203ENST00000434601 KCNK15Q9H427 330 aa9.65□□□□□ -0.86
LINC00539-203ENST00000434601 CYSLTR2Q9NS75 346 aa9.65□□□□□ -0.86
LINC00539-203ENST00000434601 PLEKHA6Q9Y2H5 1048 aa9.65□□□□□ -0.86
LINC00539-203ENST00000434601 MRPS28Q9Y2Q9 187 aaKnown RBP9.65□□□□□ -0.86
LINC00539-203ENST00000434601 SPEF1Q9Y4P9 236 aa9.65□□□□□ -0.86
LINC00539-203ENST00000434601 RTTNQ86VV8 2226 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 TMEM272A0A1B0GTI8 110 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 FABP12A6NFH5 140 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 ATP6V1G2-DDX39BF2Z307 99 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 BPNT1O95861 308 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 PTAFRP25105 342 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 CD40LGP29965 261 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 GCH1P30793 250 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 MPV17P39210 176 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 OR3A4PP47883 348 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RBP2P50120 134 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 FUT6P51993 359 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 PPP5CP53041 499 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RPS23P62266 143 aaKnown RBP9.64□□□□□ -0.87
LINC00539-203ENST00000434601 PSG7Q13046 419 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 C2orf76Q3KRA6 126 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 ZNF718Q3SXZ3 478 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 DMRTC1Q5HYR2 192 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 MBNL2Q5VZF2 373 aaKnown RBP9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RGS7BPQ6MZT1 257 aaPredicted RBP9.64□□□□□ -0.87
LINC00539-203ENST00000434601 CRIP3Q6Q6R5 217 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RNF144BQ7Z419 303 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 BHLHE23Q8NDY6 225 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 OR4M1Q8NGD0 313 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 SYNPRQ8TBG9 265 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 HPSE2Q8WWQ2 592 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RFT1Q96AA3 541 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 HAVCR1Q96D42 359 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 WFIKKN1Q96NZ8 548 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 LIME1Q9H400 295 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 NGBQ9NPG2 151 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 RHBDL2Q9NX52 303 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 MRPL15Q9P015 296 aaKnown RBP9.64□□□□□ -0.87
LINC00539-203ENST00000434601 MPC1Q9Y5U8 109 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 ARID1AO14497 2285 aa9.64□□□□□ -0.87
LINC00539-203ENST00000434601 NSD1Q96L73 2696 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 LDLRAD4O15165 306 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 LILRA1O75019 489 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 UBBP0CG47 229 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 RAB6AP20340 208 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 KITLGP21583 273 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 PTBP1P26599 531 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 GLRXP35754 106 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 ATP1B3P54709 279 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 MTCP1P56278 107 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 ZP1P60852 638 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 NKX6-1P78426 367 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 PLA2G7Q13093 441 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 SNTB1Q13884 538 aaKnown RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 IL18Q14116 193 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 ZNF79Q15937 498 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 CEACAM21Q3KPI0 293 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 TMEM255AQ5JRV8 349 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 GLIPR1L1Q6UWM5 242 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 BAIAP2L2Q6UXY1 529 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 ANGPTL5Q86XS5 388 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 OR5D18Q8NGL1 313 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 TNFAIP8L1Q8WVP5 186 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 RAB40AQ8WXH6 277 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 SOSTQ9BQB4 213 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 SRRQ9GZT4 340 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 FGF23Q9GZV9 251 aaPredicted RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 ABCG5Q9H222 651 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 PALMDQ9NP74 551 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 GHRLQ9UBU3 117 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 NDRG3Q9UGV2 375 aa9.63□□□□□ -0.87
LINC00539-203ENST00000434601 PURGQ9UJV8 347 aaKnown RBP9.63□□□□□ -0.87
LINC00539-203ENST00000434601 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 PQLC2LA1A4F0 135 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 OR5B21A6NL26 309 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 ABCD4O14678 606 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 TIMM8AO60220 97 aaPredicted RBP9.62□□□□□ -0.87
LINC00539-203ENST00000434601 PTGFRP43088 359 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 ALDH3B1P43353 468 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 NR4A2P43354 598 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 MMP15P51511 669 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 EFNB2P52799 333 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 QRFPP83859 136 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 MADCAM1Q13477 382 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 C16orf87Q6PH81 154 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 OR2W3Q7Z3T1 314 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 BIVMQ86UB2 503 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 NUP37Q8NFH4 326 aa9.62□□□□□ -0.87
LINC00539-203ENST00000434601 OR5P3Q8WZ94 311 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms