RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 FCGR2BP31994 310 aaPredicted RBP10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 CLDN18P56856 261 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 ELAVL1Q15717 326 aaKnown RBP10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 LIPNQ5VXI9 398 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 ASCL4Q6XD76 172 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 FLVCR2Q9UPI3 526 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 SNED1Q8TER0 1413 aa10.03□□□□□ -0.8
CACNA1C-217ENST00000399641 IGKV3D-20A0A0C4DH25 116 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 OR4A8P0C604 315 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 ZGLP1P0C6A0 271 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 SPI1P17947 270 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 MFSD4AQ8N468 514 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 OR5R1Q8NH85 324 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 SLC25A43Q8WUT9 341 aaPredicted RBP10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 TMEM255BQ8WV15 326 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 SLC35B4Q969S0 331 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 WDR89Q96FK6 387 aaPredicted RBP10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 GABARAPL3Q9BY60 117 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 MYH10P35580 1976 aa10.02□□□□□ -0.8
CACNA1C-217ENST00000399641 GSTZ1O43708 216 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 HAAOP46952 286 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 PRRX1P54821 245 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ROM1Q03395 351 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 SLC16A13Q7RTY0 426 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ADGRE4PQ86SQ3 457 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 OR52B4Q8NGK2 314 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ZNF300Q96RE9 604 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 TMEM204Q9BSN7 226 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 LYRM2Q9NU23 88 aaPredicted RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 GFYI3L273 518 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 F2RL2O00254 374 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 GASTP01350 101 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 GGTLC2Q14390 218 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 SMN1Q16637 294 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 CGB2Q6NT52 195 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 LFNGQ8NES3 379 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 CADM4Q8NFZ8 388 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 MPDU1O75352 247 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ZNF205O95201 554 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 GABRB1P18505 474 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 HTR6P50406 440 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ECSCRQ19T08 205 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 MRPL54Q6P161 138 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 BLOC1S3Q6QNY0 202 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 FBXO27Q8NI29 283 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 PATE1Q8WXA2 126 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 PIK3IP1Q96FE7 263 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 KLK15Q9H2R5 256 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 KIR3DX1Q9H7L2 352 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 FCGR3BO75015 233 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 RPL12P30050 165 aaKnown RBP10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 ZNF628Q5EBL2 1059 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 WBP2Q969T9 261 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 EVA1AQ9H8M9 152 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 PEAK1Q9H792 1746 aa10.02□□□□□ -0.81
CACNA1C-217ENST00000399641 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 MFNGO00587 321 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 SDHDO14521 159 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 TCRBP04435 133 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CA10Q9NS85 328 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 OR2A25A4D2G3 310 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CLDN24A6NM45 220 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 GPRIN2O60269 458 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 PF4P02776 101 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 EPXP11678 715 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CD1EP15812 388 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 FOXK2Q01167 660 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 NCMAPQ5T1S8 102 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CLDN22Q8N7P3 220 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 OR1L1Q8NH94 360 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 SLC35A4Q96G79 324 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CLEC2LP0C7M8 214 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 POU3F3P20264 500 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 HIST3H3Q16695 136 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 RPL22L1Q6P5R6 122 aaKnown RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 SLC16A12Q6ZSM3 486 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 SLC36A1Q7Z2H8 476 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 ZNF511Q8NB15 262 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 TOPAZ1Q8N9V7 1692 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 GIPP09681 153 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CDX1P47902 265 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 KCNJ3P48549 501 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 CLDN8P56748 225 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 SOX8P57073 446 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 AESQ08117 197 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 RNF212Q495C1 297 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 FAM71E1Q6IPT2 247 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 TBX21Q9UL17 535 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 A6NJY4 79 aa10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 PRKNO60260 465 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-217ENST00000399641 PAPLNO95428 1278 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms