RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FAM76BQ5HYJ3 339 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 ZNF573Q86YE8 665 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 RFT1Q96AA3 541 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 FN3KRPQ9HA64 309 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 TREM2Q9NZC2 230 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 PPP1R3CQ9UQK1 317 aa19.96■□□□□ 0.79
TSPAN4-203ENST00000397397 USF3Q68DE3 2245 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 CDC14BO60729 498 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 ADRA2CP18825 462 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 PTH2RP49190 550 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 ATP5J2P56134 94 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 KISS1Q15726 138 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 HAGHLQ6PII5 290 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 RNF144BQ7Z419 303 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 ANGPTL5Q86XS5 388 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 SCCPDHQ8NBX0 429 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 PERPQ96FX8 193 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 GPER1Q99527 375 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 GCM1Q9NP62 436 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 BEX4Q9NWD9 120 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 C1orf123Q9NWV4 160 aa19.95■□□□□ 0.78
TSPAN4-203ENST00000397397 IGHV1-69-2A0A0G2JMI3 117 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 SHISA3A0PJX4 238 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 GABARAPO95166 117 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 IGHV4-39P01824 125 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 DAOP14920 347 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 PAX1P15863 534 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 TGFBR1P36897 503 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 NKAIN3Q8N8D7 197 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 ZNF420Q8TAQ5 688 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 NINJ1Q92982 152 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 ERGIC1Q969X5 290 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 CPNE2Q96FN4 548 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 TLNRD1Q9H1K6 362 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 AK6Q9Y3D8 172 aaKnown RBP19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 CSMD2Q7Z408 3487 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 DYSFO75923 2080 aa19.94■□□□□ 0.78
TSPAN4-203ENST00000397397 TRIM64BA6NI03 449 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CDIPTO14735 213 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 PDCD5O14737 125 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 PLATP00750 562 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 ZNF93P35789 620 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 PMELP40967 661 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 MTNR1BP49286 362 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 POU3F4P49335 361 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 NCS1P62166 190 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 DEFB113Q30KQ7 82 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 ZNF826PQ6ZT77 177 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CDH24Q86UP0 819 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CALHM1Q8IU99 346 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 C11orf53Q8IXP5 236 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 JAGN1Q8N5M9 183 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 RDH5Q92781 318 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 NKX3-1Q99801 234 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 GSX2Q9BZM3 304 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CACNG2Q9Y698 323 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 SPG11Q96JI7 2443 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 PDZD2O15018 2839 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 TANC2Q9HCD6 1990 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 hCG_1807616A0A1W2PRN6 198 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 LYNX1G3V0Z9 82 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 J3QT63 122 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 LYNX1P0DP58 116 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 COL8A2P25067 703 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 VBP1P61758 197 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 HNRNPA0Q13151 305 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 GLT8D1Q68CQ7 371 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CRIP3Q6Q6R5 217 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 TGIF2LYQ8IUE0 185 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 OR5D18Q8NGL1 313 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 OR11L1Q8NGX0 322 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 CCL17Q92583 94 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 YIPF5Q969M3 257 aa19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 BARX1Q9HBU1 254 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-203ENST00000397397 SSX4O60224 188 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 NOL3O60936 208 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 CDRT1O95170 752 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 SDC2P34741 201 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 MRPS11P82912 194 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 CTF1Q16619 201 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 HFEQ30201 348 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 CDH26Q8IXH8 852 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 Q8TCH9 128 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 AQP3Q92482 292 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 MBD6Q96DN6 1003 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 GFI1Q99684 422 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 PKIBQ9C010 78 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 METTL17Q9H7H0 456 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 CEPT1Q9Y6K0 416 aa19.92■□□□□ 0.78
TSPAN4-203ENST00000397397 SYNGR1O43759 233 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 RHBDL1O75783 438 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 IRF2P14316 349 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 RAB3BP20337 219 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 RBMXP38159 391 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 TMBIM6P55061 237 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 MXD1Q05195 221 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 PDZK1IP1Q13113 114 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 WDR82Q6UXN9 313 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 SLC25A26Q70HW3 274 aa19.91■□□□□ 0.78
TSPAN4-203ENST00000397397 TPRA1Q86W33 373 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms