RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 OR5H8P0DN80 308 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 MMP16P51512 607 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 SSTP61278 116 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 PPA1Q15181 289 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 Q3ZCU0 254 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 C17orf78Q8N4C9 275 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 PLA2G2FQ9BZM2 168 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 A0A0A6YYD4 124 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 PMS2P1A4D2B8 440 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RER1O15258 196 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 HSPA12AO43301 675 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RAMP1O60894 148 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 ISG15P05161 165 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 MYOGP15173 224 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 CDX1P47902 265 aaPredicted RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RRADP55042 308 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RPS23P62266 143 aaKnown RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 GAMTQ14353 236 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 H1FNTQ75WM6 255 aaPredicted RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 HAS2Q92819 552 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 LIN37Q96GY3 246 aaPredicted RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
TRUB1-201ENST00000298746 PARPBPQ9NWS1 579 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 AK3Q9UIJ7 227 aa10.08□□□□□ -0.8
TRUB1-201ENST00000298746 SMCO3A2RU48 225 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 BTBD17A6NE02 478 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TMEM14DPA8MWL7 114 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 H3BQ15 152 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 ST8SIA3O43173 380 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 PHF1O43189 567 aaPredicted RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 DEDDO75618 318 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 F10P00742 488 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF728P0DKX0 622 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TAF9Q16594 264 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 CDCP2Q5VXM1 449 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TMEM268Q5VZI3 342 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 LYZL2Q7Z4W2 148 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 ARHGEF39Q8N4T4 335 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 COMMD1Q8N668 190 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 MAGT1Q9H0U3 335 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 LIPGQ9Y5X9 500 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 IGHV3-20A0A0C4DH32 117 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 KIR2DS5A0A0G2JLQ3 304 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 A0A0G2JNG1 304 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 H0YL77 283 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 KIR2DS3K7RE56 304 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 IGHV2-5P01817 119 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TRGC2P03986 189 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 GAPDHP04406 335 aaKnown RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 MDKP21741 143 aaPredicted RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 FOXK1P85037 733 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 KIR2DS5Q14953 304 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TMEM123Q8N131 208 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 CA5BP1Q8WTZ4 195 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 PTPMT1Q8WUK0 201 aaPredicted RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 RNF133Q8WVZ7 376 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 KLRF1Q9NZS2 232 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 SUSD2Q9UGT4 822 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 FAM230AA0A1W2PPH8 454 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 LOC390937A0A1W2PQ73 354 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 VSTM2BA6NLU5 285 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 COL9A1P20849 921 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 SFTPDP35247 375 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 HERV-K104P61576 105 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 GABREP78334 506 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 HGFACQ04756 655 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 KISS1Q15726 138 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 PCK2Q16822 640 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF429Q86V71 674 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 RAB39BQ96DA2 213 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 VN1R1Q9GZP7 353 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
TRUB1-201ENST00000298746 TMEM184BQ9Y519 407 aaPredicted RBP10.07□□□□□ -0.8
TRUB1-201ENST00000298746 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
TRUB1-201ENST00000298746 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
TRUB1-201ENST00000298746 DANCRP0C864 163 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 HOXA5P20719 270 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 CFPP27918 469 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 HTR5AP47898 357 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 PRSS12P56730 875 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 RPL23AP62750 156 aaKnown RBP10.06□□□□□ -0.8
TRUB1-201ENST00000298746 DLK1P80370 383 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 AADACL3Q5VUY0 350 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 C20orf196Q8IYI0 205 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 BATF2Q8N1L9 274 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 LFNGQ8NES3 379 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 OR8B12Q8NGG6 310 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 POM121Q96HA1 1249 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 TAAR9Q96RI9 348 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 ZNF160Q9HCG1 818 aa10.06□□□□□ -0.8
TRUB1-201ENST00000298746 SRPK3Q9UPE1 567 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms