RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ZNF529Q6P280 563 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 DNAAF1Q8NEP3 725 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 TRMT10AQ8TBZ6 339 aaKnown RBP15.57■□□□□ 0.08
RFFL-211ENST00000584541 NPRL2Q8WTW4 380 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 RPL3LQ92901 407 aaKnown RBP15.57■□□□□ 0.08
RFFL-211ENST00000584541 BORCS8Q96FH0 119 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 CXorf56Q9H5V9 222 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 SNTG1Q9NSN8 517 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 IL19Q9UHD0 177 aa15.57■□□□□ 0.08
RFFL-211ENST00000584541 FAM230AA0A1W2PPH8 454 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 TMEM210A6NLX4 147 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 ZNF732B4DXR9 585 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 H7C417 338 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 PDCD5O14737 125 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 MAS1P04201 325 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 CD55P08174 381 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 TNFRSF1AP19438 455 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 CD200P41217 278 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 RBP2P50120 134 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 GPM6AP51674 278 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 ATP1B3P54709 279 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 LSM3P62310 102 aaKnown RBP15.56■□□□□ 0.08
RFFL-211ENST00000584541 TESK1Q15569 626 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 DMRTC1Q5HYR2 192 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 ASPHD2Q6ICH7 369 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 LHFPL2Q6ZUX7 228 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 ZCCHC24Q8N2G6 241 aaKnown RBP15.56■□□□□ 0.08
RFFL-211ENST00000584541 CELF2-AS1Q8N7Q2 184 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 NKAIN3Q8N8D7 197 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 HPSE2Q8WWQ2 592 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 CENPOQ9BU64 300 aa15.56■□□□□ 0.08
RFFL-211ENST00000584541 PPIL3Q9H2H8 161 aaKnown RBP15.56■□□□□ 0.08
RFFL-211ENST00000584541 TRAV1-2A0A0B4J238 106 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 IGKV1-9A0A0C4DH69 117 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 CCDC160A6NGH7 325 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 GABARAPO95166 117 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 ALDOBP05062 364 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 TMBIM6P55061 237 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 MTCP1P56278 107 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 CCL8P80075 99 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 DDI2Q5TDH0 399 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 OR51A2Q8NGJ7 313 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 RAB2BQ8WUD1 216 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 NEU4Q8WWR8 484 aaPredicted RBP15.55■□□□□ 0.08
RFFL-211ENST00000584541 MEGF10Q96KG7 1140 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 OR2V2Q96R30 315 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 BCL7BQ9BQE9 202 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 SAP30LQ9HAJ7 183 aa15.55■□□□□ 0.08
RFFL-211ENST00000584541 HRNRQ86YZ3 2850 aaPredicted RBP15.54■□□□□ 0.08
RFFL-211ENST00000584541 PQLC2LA1A4F0 135 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 GRPP07492 148 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 PRF1P14222 555 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 THBS2P35442 1172 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 CDKN1AP38936 164 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 MTNR1BP49286 362 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 PSMD7P51665 324 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 MAB21L1Q13394 359 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 SLC16A12Q6ZSM3 486 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 TPRA1Q86W33 373 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 ZNF573Q86YE8 665 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 ITLN1Q8WWA0 313 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 GPER1Q99527 375 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 NAA50Q9GZZ1 169 aaKnown RBP15.54■□□□□ 0.08
RFFL-211ENST00000584541 NDUFA13Q9P0J0 144 aa15.54■□□□□ 0.08
RFFL-211ENST00000584541 CHD3Q12873 2000 aaKnown RBP15.54■□□□□ 0.08
RFFL-211ENST00000584541 LRP5LA4QPB2 252 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 A6NLC8 198 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 OVOL3O00110 214 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 ZNF93P35789 620 aaPredicted RBP15.53■□□□□ 0.08
RFFL-211ENST00000584541 KRTAP10-9P60411 292 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 GLT8D1Q68CQ7 371 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 LRRTM1Q86UE6 522 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 CDH26Q8IXH8 852 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 PNLDC1Q8NA58 520 aaKnown RBP15.53■□□□□ 0.08
RFFL-211ENST00000584541 OR52N4Q8NGI2 321 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 ZNF420Q8TAQ5 688 aaPredicted RBP15.53■□□□□ 0.08
RFFL-211ENST00000584541 IGFBPL1Q8WX77 278 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 FOXRED1Q96CU9 486 aaPredicted RBP15.53■□□□□ 0.08
RFFL-211ENST00000584541 SORCS2Q96PQ0 1159 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 LIME1Q9H400 295 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 RNF167Q9H6Y7 350 aa15.53■□□□□ 0.08
RFFL-211ENST00000584541 LOC100289279A0A1B0GTE1 492 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 SMIM31A0A1B0GVY4 71 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 RAB3BP20337 219 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 DNASE1P24855 282 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 HAAOP46952 286 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 VBP1P61758 197 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 NCS1P62166 190 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 KISS1Q15726 138 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 CTF1Q16619 201 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 JAGN1Q8N5M9 183 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 NRGNQ92686 78 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 ERGIC1Q969X5 290 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 FGF23Q9GZV9 251 aaPredicted RBP15.52■□□□□ 0.08
RFFL-211ENST00000584541 OR51I2Q9H344 312 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 FN3KRPQ9HA64 309 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 AK6Q9Y3D8 172 aaKnown RBP15.52■□□□□ 0.08
RFFL-211ENST00000584541 CEPT1Q9Y6K0 416 aa15.52■□□□□ 0.08
RFFL-211ENST00000584541 TANC2Q9HCD6 1990 aa15.52■□□□□ 0.07
RFFL-211ENST00000584541 CACNA1DQ01668 2161 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms