RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 TMEM186Q96B77 213 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 LGALS12Q96DT0 336 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 LYZL4Q96KX0 146 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 C4orf36Q96KX1 117 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 TECTBQ96PL2 329 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 OR8B2Q96RD0 313 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 SOX7Q9BT81 388 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 ALG8Q9BVK2 526 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 ABCB9Q9NP78 766 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 GPR173Q9NS66 373 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 OR5V1Q9UGF6 321 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 NUFIP1Q9UHK0 495 aaKnown RBP6.73□□□□□ -1.33
LRRC28-219ENST00000560483 CDC42EP3Q9UKI2 254 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 MPC1Q9Y5U8 109 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 DOCK11Q5JSL3 2073 aa6.73□□□□□ -1.33
LRRC28-219ENST00000560483 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 TRAV38-1A0A0B4J264 116 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 A0A0G2JMP0 313 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 A0A0U1RQV5 110 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 A0A0X1KG70 313 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 FAM230AA0A1W2PPH8 454 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 IRGMA1A4Y4 181 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF732B4DXR9 585 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SLC16A6O15403 523 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 PLPP2O43688 288 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 FOXH1O75593 365 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 DHRS3O75911 302 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 INMTO95050 263 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 PNPP00491 289 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SERPINA3P01011 423 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 NRASP01111 189 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 IFNA2P01563 188 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 IGHV2-70P01814 119 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 IGHV2-5P01817 119 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 TTRP02766 147 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 UBCP0CG48 685 aaKnown RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SRD5A1P18405 259 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ACKR3P25106 362 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 DCTDP32321 178 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 CAPGP40121 348 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 GBX2P52951 348 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 OR12D2P58182 307 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 CSNK2BP67870 215 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF85Q03923 595 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 RAB40BQ12829 278 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SMN1Q16637 294 aaKnown RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 FAM120AOSQ5T036 256 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF691Q5VV52 312 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 PRSS45Q7RTY3 260 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ELMOD2Q8IZ81 293 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 CELF2-AS1Q8N7Q2 184 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ZNF676Q8N7Q3 588 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 OR1M1Q8NGA1 313 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 OR4M2Q8NGB6 313 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 RHOXF1Q8NHV9 184 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 TRMT10AQ8TBZ6 339 aaKnown RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 FBLIM1Q8WUP2 373 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 TSEN15Q8WW01 171 aaKnown RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 RPL3LQ92901 407 aaKnown RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 COMMD4Q9H0A8 199 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 METTL17Q9H7H0 456 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-219ENST00000560483 PPP1R3EQ9H7J1 279 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 LPAR3Q9UBY5 353 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 MIOXQ9UGB7 285 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SLC7A11Q9UPY5 501 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 ARHGAP32A7KAX9 2087 aa6.72□□□□□ -1.33
LRRC28-219ENST00000560483 SETD2Q9BYW2 2564 aaPredicted RBP6.71□□□□□ -1.33
LRRC28-219ENST00000560483 NAV3Q8IVL0 2385 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TRAV20A0A0B4J274 112 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 LOC107986453A0A1B0GWG9 222 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 OOEPA6NGQ2 149 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 NKX6-3A6NJ46 265 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM210A6NLX4 147 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CEACAM18A8MTB9 384 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 PHF1O43189 567 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ADAM20O43506 726 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CRLF1O75462 422 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 GATBO75879 557 aaKnown RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 PLATP00750 562 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CST4P01036 141 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 GYPAP02724 150 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ATP6V1B1P15313 513 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF12P17014 697 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 GLRA1P23415 457 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 PMELP40967 661 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 GABRA2P47869 451 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 PITPNBP48739 271 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 CAPZA1P52907 286 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 DVL1P1P54792 670 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 LMO4P61968 165 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 GNG3P63215 75 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 HOXA4Q00056 320 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-219ENST00000560483 ZNF154Q13106 437 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 IL18R1Q13478 541 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 MICBQ29980 383 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 TMEM155Q4W5P6 130 aa6.71□□□□□ -1.34
LRRC28-219ENST00000560483 WDR38Q5JTN6 314 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms