RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SOX2P48431 317 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 FUT6P51993 359 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 GP2P55259 537 aaKnown RBP10.72□□□□□ -0.69
SYNE2-219ENST00000555323 DSCR9P59020 149 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 ZNF154Q13106 437 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 SHEQ5VZ18 495 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 TMEM91Q6ZNR0 172 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 WDR86Q86TI4 376 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 OR1M1Q8NGA1 313 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 TSEN15Q8WW01 171 aaKnown RBP10.72□□□□□ -0.69
SYNE2-219ENST00000555323 DVL3Q92997 716 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-219ENST00000555323 YIPF5Q969M3 257 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 SPSB1Q96BD6 273 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 TMED9Q9BVK6 235 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 RTL8AQ9BWD3 113 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 OR51I2Q9H344 312 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 GPR173Q9NS66 373 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 NDUFB11Q9NX14 153 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 ARID1AO14497 2285 aa10.72□□□□□ -0.69
SYNE2-219ENST00000555323 IGHV1-69-2A0A0G2JMI3 117 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 ZNF732B4DXR9 585 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 TPD52L2O43399 206 aaKnown RBP10.71□□□□□ -0.69
SYNE2-219ENST00000555323 SSX4O60224 188 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 FSTL3O95633 263 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 ALDOBP05062 364 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 CSF3P09919 207 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 FSTP19883 344 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 PRKACBP22694 351 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 GIFP27352 417 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 MAPK3P27361 379 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-219ENST00000555323 PSMB9P28065 219 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 TMEM33P57088 247 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 RIN1Q13671 783 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 CNN3Q15417 329 aaKnown RBP10.71□□□□□ -0.69
SYNE2-219ENST00000555323 MPPED2Q15777 294 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 NEDD8Q15843 81 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 HFEQ30201 348 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 PLCXD3Q63HM9 321 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 NAV2Q8IVL1 2488 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 TMEM203Q969S6 136 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 OR14A2Q96R54 314 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 CHODLQ9H9P2 273 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 VCX3AQ9NNX9 186 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 PPP1R3CQ9UQK1 317 aa10.71□□□□□ -0.69
SYNE2-219ENST00000555323 POLQO75417 2590 aa10.71□□□□□ -0.7
SYNE2-219ENST00000555323 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 NDUFS8O00217 210 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 SULT1B1O43704 296 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 LHBP01229 141 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 ACAA1P09110 424 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-219ENST00000555323 UCHL1P09936 223 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 RAB3AP20336 220 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 TGFBR2P37173 567 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 PDLIM4P50479 330 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 GPM6AP51674 278 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 RPS25P62851 125 aaKnown RBP10.7□□□□□ -0.7
SYNE2-219ENST00000555323 FABP5Q01469 135 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 INSL4Q14641 139 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF573Q86YE8 665 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 TGIF2LYQ8IUE0 185 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 ZNF525Q8N782 197 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 CCL17Q92583 94 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 MRPS26Q9BYN8 205 aaKnown RBP10.7□□□□□ -0.7
SYNE2-219ENST00000555323 FN3KRPQ9HA64 309 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 NEK6Q9HC98 313 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 NOX4Q9NPH5 578 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
SYNE2-219ENST00000555323 IGKV1-27A0A075B6S5 117 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 TRIM64BA6NI03 449 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 VWC2LB2RUY7 222 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 LYNX1G3V0Z9 82 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 TMEM178BH3BS89 294 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 GABRPO00591 440 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CDIPTO14735 213 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CDC14BO60729 498 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 RGS9O75916 674 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-219ENST00000555323 TFAP2AP05549 437 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 GRPP07492 148 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 LYNX1P0DP58 116 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CD37P11049 281 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 MPZP25189 248 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
SYNE2-219ENST00000555323 FGF9P31371 208 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-219ENST00000555323 RBP2P50120 134 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 ART1P52961 327 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CLEC12BQ2HXU8 276 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 PRAMEF6Q5VXH4 476 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CEACAM19Q7Z692 300 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 MOGAT3Q86VF5 341 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 CDH26Q8IXH8 852 aa10.69□□□□□ -0.7
SYNE2-219ENST00000555323 SCCPDHQ8NBX0 429 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms