RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PCK2Q16822 640 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 CLEC12BQ2HXU8 276 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 C11orf88Q6PI97 169 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 IGFL2Q6UWQ7 119 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 OR52H1Q8NGJ2 320 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 DERL3Q96Q80 235 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 SLC6A7Q99884 636 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 SMR3AQ99954 134 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 TMEM138Q9NPI0 162 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 NPDC1Q9NQX5 325 aaPredicted RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 ZNF281Q9Y2X9 895 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 HILPDAQ9Y5L2 63 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ZNF724A8MTY0 619 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 E7EQL1 145 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 LALBAP00709 142 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 CD3GP09693 182 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 CRHBPP24387 322 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 APOBEC3AP31941 199 aaPredicted RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 SH3BGRP55822 239 aaPredicted RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 RPS4XP62701 263 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 MOGQ16653 247 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 ZMAT1Q5H9K5 638 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 TRIQKQ629K1 86 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 FAHD1Q6P587 224 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 DRAXINQ8NBI3 349 aaPredicted RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 RBMXL1Q96E39 390 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 ADGRL4Q9HBW9 690 aa6.23□□□□□ -1.41
MSH6-209ENST00000538136 RBFOX1Q9NWB1 397 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 PURGQ9UJV8 347 aaKnown RBP6.23□□□□□ -1.41
MSH6-209ENST00000538136 SYNGR1O43759 233 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SS18L1O75177 396 aaPredicted RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 SEMG1P04279 462 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 GSTP1P09211 210 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 RAB3BP20337 219 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 LIMS1P48059 325 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CDK5Q00535 292 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 GRK1Q15835 563 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 RPUSD3Q6P087 351 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 C1orf87Q8N0U7 546 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 OR52N4Q8NGI2 321 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ASB17Q8WXJ9 295 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SGK3Q96BR1 496 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CENPOQ9BU64 300 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 MOV10Q9HCE1 1003 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 PLSCR4Q9NRQ2 329 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ST3GAL6Q9Y274 331 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ZANQ9Y493 2812 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 METTL21EPA6NDL7 271 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 H0YJX3 145 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SYNGR3O43761 229 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 WBP4O75554 376 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 RHBDL1O75783 438 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 KNG1P01042 644 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SRP9P49458 86 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 HMGA2P52926 109 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ENDOGQ14249 297 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 CNN3Q15417 329 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 SLC25A47Q6Q0C1 308 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 DRAM2Q6UX65 266 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ARMC10Q8N2F6 343 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 PACRGLQ8N7B6 248 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ZNF454Q8N9F8 522 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ADGRG7Q96K78 797 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 BCO1Q9HAY6 547 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 ZSCAN5BA6NJL1 495 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 A6NNC1 897 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CLDN25C9JDP6 229 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CDK1P06493 297 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 VAMP1P23763 118 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 BDKRB2P30411 391 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 NANOS3P60323 173 aaKnown RBP6.22□□□□□ -1.41
MSH6-209ENST00000538136 TMED1Q13445 227 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SSX9Q7RTT3 188 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 SPARTQ8N0X7 666 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 MRGPRDQ8TDS7 321 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CASTOR1Q8WTX7 329 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 CLCC1Q96S66 551 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 C14orf119Q9NWQ9 140 aa6.22□□□□□ -1.41
MSH6-209ENST00000538136 IGHV1-69-2A0A0G2JMI3 117 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 ZNF816-ZNF321PA0A0X1KG74 233 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 PHYHO14832 338 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 NDUFB3O43676 98 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 COL8A2P25067 703 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 LIPAP38571 399 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 RAB11BQ15907 218 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 FAM216BQ8N7L0 139 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 ADAT3Q96EY9 351 aaPredicted RBP6.21□□□□□ -1.41
MSH6-209ENST00000538136 DDX28Q9NUL7 540 aaKnown RBP6.21□□□□□ -1.41
MSH6-209ENST00000538136 ZNF319Q9P2F9 582 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 R4GMQ9 66 aa6.21□□□□□ -1.41
MSH6-209ENST00000538136 IGLV1-36A0A0B4J1U3 117 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 SDCBPO00560 298 aaPredicted RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 GABRPO00591 440 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 DENRO43583 198 aaKnown RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 NXPH3O95157 252 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 HOXB9P17482 250 aaPredicted RBP6.21□□□□□ -1.42
MSH6-209ENST00000538136 OR3A4PP47883 348 aa6.21□□□□□ -1.42
MSH6-209ENST00000538136 AESQ08117 197 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms