RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 UBE2V2Q15819 145 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ZBTB37Q5TC79 503 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 PP6455Q8WZ26 134 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ITFG2Q969R8 447 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ELMOD3Q96FG2 381 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ADAT1Q9BUB4 502 aaKnown RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 PALMDQ9NP74 551 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 GPR173Q9NS66 373 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 SNTG1Q9NSN8 517 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 FBXO9Q9UK97 447 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ZDHHC8Q9ULC8 765 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ANXA2P2A6NMY6 339 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 MLNRO43193 412 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 CST4P01036 141 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 NRASP01111 189 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 OCMP0CE72 109 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 IGFBP3P17936 291 aaPredicted RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 RAB3AP20336 220 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 RPS19P39019 145 aaKnown RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 PPP3R1P63098 170 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 CLVS2Q5SYC1 327 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 USP43Q70EL4 1123 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 OR8S1Q8NH09 359 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 SLITRK2Q9H156 845 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 DCSTAMPQ9H295 470 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 FOXJ3Q9UPW0 622 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 AK6Q9Y3D8 172 aaKnown RBP12.12□□□□□ -0.47
CLDN11-209ENST00000489485 MPC1Q9Y5U8 109 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 ARID1AO14497 2285 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 TPD52L2O43399 206 aaKnown RBP12.11□□□□□ -0.47
CLDN11-209ENST00000489485 NCR1O76036 304 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 IGHV1-46P01743 117 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 CLEC2LP0C7M8 214 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 FSTP19883 344 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 MTNR1BP49286 362 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 PPOXP50336 477 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 CAV3P56539 151 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 CCL8P80075 99 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 PLCXD3Q63HM9 321 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 MOB3CQ70IA8 216 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 DNAAF1Q8NEP3 725 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 OR1M1Q8NGA1 313 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 PIGTQ969N2 578 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 HIST1H2AAQ96QV6 131 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
CLDN11-209ENST00000489485 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 F5H5P2 479 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 SULT1B1O43704 296 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 ADRA2CP18825 462 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 OR10A3P58181 314 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 UTS2BQ765I0 119 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 NR2C2APQ86WQ0 139 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 UBASH3BQ8TF42 649 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 NKX3-1Q99801 234 aaPredicted RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 DECR2Q9NUI1 292 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 NOP16Q9Y3C1 178 aaKnown RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 RAB3BP20337 219 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 TNFSF4P23510 183 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 TNFAIP6P98066 277 aaPredicted RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 OR52N4Q8NGI2 321 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 TRMT10AQ8TBZ6 339 aaKnown RBP12.1□□□□□ -0.47
CLDN11-209ENST00000489485 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 DIRC2Q96SL1 478 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 TMEM138Q9NPI0 162 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 NKIRAS2Q9NYR9 191 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 CSMD1Q96PZ7 3565 aa12.1□□□□□ -0.47
CLDN11-209ENST00000489485 H7C417 338 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 OVOL3O00110 214 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 IL1AP01583 271 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 HCKP08631 526 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 ZNF182P17025 639 aaPredicted RBP12.09□□□□□ -0.47
CLDN11-209ENST00000489485 ATF1P18846 271 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 BDKRB2P30411 391 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 FAM209AQ5JX71 171 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 TPRA1Q86W33 373 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 SPERTQ8NA61 448 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 TBC1D15Q8TC07 691 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 IGFBPL1Q8WX77 278 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 OR5P3Q8WZ94 311 aa12.09□□□□□ -0.47
CLDN11-209ENST00000489485 RNF170Q96K19 258 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms