RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PAK1IP1Q9NWT1 392 aaPredicted RBP12.87□□□□□ -0.35
SND1-203ENST00000463020 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
SND1-203ENST00000463020 ENPP5Q9UJA9 477 aa12.87□□□□□ -0.35
SND1-203ENST00000463020 VPREB3Q9UKI3 123 aa12.87□□□□□ -0.35
SND1-203ENST00000463020 FOXJ3Q9UPW0 622 aa12.87□□□□□ -0.35
SND1-203ENST00000463020 TET2Q6N021 2002 aaPredicted RBP12.86□□□□□ -0.35
SND1-203ENST00000463020 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
SND1-203ENST00000463020 NDUFB2O95178 105 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 MT-ND2P03891 347 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 TFF1P04155 84 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 LCATP04180 440 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 LIPFP07098 398 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 OSMP13725 252 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 SELLP14151 372 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 RPS27P42677 84 aaKnown RBP12.86□□□□□ -0.35
SND1-203ENST00000463020 OMPP47874 163 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 CRISP1P54107 249 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 ZNF92Q03936 586 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 FAM189A2Q15884 450 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 SLC35E4Q6ICL7 350 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 GDPGP1Q6ZNW5 385 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 Q8N7P7 452 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 ST8SIA4Q92187 359 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 SGCDQ92629 289 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 NIPSNAP1Q9BPW8 284 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 FUNDC2Q9BWH2 189 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 PPP1R3EQ9H7J1 279 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 PLGRKTQ9HBL7 147 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 SRA1Q9HD15 236 aaKnown RBP12.86□□□□□ -0.35
SND1-203ENST00000463020 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
SND1-203ENST00000463020 B9D1Q9UPM9 204 aa12.86□□□□□ -0.35
SND1-203ENST00000463020 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 EFCAB10A6NFE3 127 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 CD300LBA8K4G0 201 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 PIN1P1O15428 100 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 INMTO95050 263 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 TXNDC12O95881 172 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 LHBP01229 141 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 GRPP07492 148 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 PSMB9P28065 219 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 EPHA2P29317 976 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 IFNGR2P38484 337 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 GP2P55259 537 aaKnown RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 CDONQ4KMG0 1287 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 SYT6Q5T7P8 510 aaPredicted RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 AHSA2Q719I0 299 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 PGAP1Q75T13 922 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 C11orf53Q8IXP5 236 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 LYG1Q8N1E2 194 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 FAM216BQ8N7L0 139 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 Q96MT0 163 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 NMNAT3Q96T66 252 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 CCL13Q99616 98 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 ATF6BQ99941 703 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 NAA50Q9GZZ1 169 aaKnown RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 MRPL22Q9NWU5 206 aaKnown RBP12.85□□□□□ -0.35
SND1-203ENST00000463020 ONECUT1Q9UBC0 465 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 PSORS1C1Q9UIG5 152 aa12.85□□□□□ -0.35
SND1-203ENST00000463020 NOTCH3Q9UM47 2321 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 TRBV4-1A0A0J9YWV2 114 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 A0A1W2PRQ8 180 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 ZAR1LA6NP61 321 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 SLC22A1O15245 554 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 FADS2O95864 444 aaKnown RBP12.84□□□□□ -0.35
SND1-203ENST00000463020 GASTP01350 101 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 OPN1MWP04001 364 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 AMY2BP19961 511 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 PAX6P26367 422 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 MAP2K4P45985 399 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 DGCR6Q14129 220 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
SND1-203ENST00000463020 SMN1Q16637 294 aaKnown RBP12.84□□□□□ -0.35
SND1-203ENST00000463020 TEX36Q5VZQ5 186 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 ZNF770Q6IQ21 691 aaPredicted RBP12.84□□□□□ -0.35
SND1-203ENST00000463020 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 C1orf122Q6ZSJ8 110 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 ADCK1Q86TW2 530 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 STX19Q8N4C7 294 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 ZNRF4Q8WWF5 429 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 PPA2Q9H2U2 334 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 DPAGT1Q9H3H5 408 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
SND1-203ENST00000463020 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms