RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 SNTG1Q9NSN8 517 aa10.46□□□□□ -0.73
LINC00339-201ENST00000404210 TRAV8-7A0A075B6U6 113 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 LOC100506127A0A0U1RQW1 187 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 LOC100289279A0A1B0GTE1 492 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 PQLC2LA1A4F0 135 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF732B4DXR9 585 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 F5H5P2 479 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 PTBP3O95758 552 aaKnown RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 MAS1P04201 325 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 ERCC1P07992 297 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 OCMP0CE72 109 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CD37P11049 281 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 AZGP1P25311 298 aaKnown RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 THBS2P35442 1172 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 GATA4P43694 442 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 RBP2P50120 134 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 PSMD7P51665 324 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 ATP1B3P54709 279 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 TMBIM6P55061 237 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 TNFAIP6P98066 277 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 TESK1Q15569 626 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 LHFPL2Q6ZUX7 228 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 LRRTM1Q86UE6 522 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 TPRA1Q86W33 373 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CLVS1Q8IUQ0 354 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 OR10AD1Q8NGE0 317 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 RPL3LQ92901 407 aaKnown RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 DVL3Q92997 716 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 ERGIC1Q969X5 290 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CCL19Q99731 98 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 BCL7BQ9BQE9 202 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 FGF23Q9GZV9 251 aaPredicted RBP10.45□□□□□ -0.74
LINC00339-201ENST00000404210 LIME1Q9H400 295 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 CXorf56Q9H5V9 222 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 DECR2Q9NUI1 292 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 NDUFA13Q9P0J0 144 aa10.45□□□□□ -0.74
LINC00339-201ENST00000404210 FAM230AA0A1W2PPH8 454 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 TRIM64BA6NI03 449 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 PDCD5O14737 125 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 GABARAPO95166 117 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 HCKP08631 526 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 PAX1P15863 534 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 MYL9P24844 172 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 MTNR1BP49286 362 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 GPM6AP51674 278 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 CCL8P80075 99 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 DMRTC1Q5HYR2 192 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 GLT8D1Q68CQ7 371 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF573Q86YE8 665 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 OR52N4Q8NGI2 321 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 OR51A2Q8NGJ7 313 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 ITLN1Q8WWA0 313 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 FOXRED1Q96CU9 486 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-201ENST00000404210 CPNE2Q96FN4 548 aaPredicted RBP10.44□□□□□ -0.74
LINC00339-201ENST00000404210 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 NAA50Q9GZZ1 169 aaKnown RBP10.44□□□□□ -0.74
LINC00339-201ENST00000404210 TLNRD1Q9H1K6 362 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 OR51I2Q9H344 312 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 TPK1Q9H3S4 243 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 RNF167Q9H6Y7 350 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 CEPT1Q9Y6K0 416 aa10.44□□□□□ -0.74
LINC00339-201ENST00000404210 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 CHD3Q12873 2000 aaKnown RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 COL12A1Q99715 3063 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 LRP5LA4QPB2 252 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 GRPP07492 148 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 ADRA2CP18825 462 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 CDKN1AP38936 164 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 MTCP1P56278 107 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 KISS1Q15726 138 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 CTF1Q16619 201 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 LYPD6Q86Y78 171 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 C11orf53Q8IXP5 236 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 NKAIN3Q8N8D7 197 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF420Q8TAQ5 688 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 TRMT10AQ8TBZ6 339 aaKnown RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 SORCS2Q96PQ0 1159 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 SAP30LQ9HAJ7 183 aa10.43□□□□□ -0.74
LINC00339-201ENST00000404210 ZNF701Q9NV72 531 aaPredicted RBP10.43□□□□□ -0.74
LINC00339-201ENST00000404210 IGKV1-27A0A075B6S5 117 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 SMIM31A0A1B0GVY4 71 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 SHISA3A0PJX4 238 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 DPPA5A6NC42 116 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 IFNL4K9M1U5 179 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
LINC00339-201ENST00000404210 HPXP02790 462 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 ACAA1P09110 424 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-201ENST00000404210 RAB3BP20337 219 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 DNASE1P24855 282 aa10.42□□□□□ -0.74
LINC00339-201ENST00000404210 SDC2P34741 201 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms