RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
MKS1-202ENST00000393119 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
MKS1-202ENST00000393119 FLVCR2Q9UPI3 526 aa12.98□□□□□ -0.33
MKS1-202ENST00000393119 CHD8Q9HCK8 2581 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 MEGF11A6BM72 1044 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 ATP6V1G2-DDX39BF2Z307 99 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 DLL1O00548 723 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 TOR1AO14656 332 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 DHFRP00374 187 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
MKS1-202ENST00000393119 ZP3P21754 424 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 CFPP27918 469 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 FAM3AP98173 230 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 HACD4Q5VWC8 232 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 CMTM3Q96MX0 182 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 DPCDQ9BVM2 203 aaPredicted RBP12.97□□□□□ -0.33
MKS1-202ENST00000393119 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 ADGRG4Q8IZF6 3080 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 ARHGAP21Q5T5U3 1957 aa12.97□□□□□ -0.33
MKS1-202ENST00000393119 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 FAM230AA0A1W2PPH8 454 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 TMEM235A6NFC5 223 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 ANGPTL7O43827 346 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 TOXO94900 526 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 ALDOBP05062 364 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 FCGR2AP12318 317 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 VEGFCP49767 419 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 RAG2P55895 527 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 PCBD1P61457 104 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 KISS1Q15726 138 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 TFAP2EQ6VUC0 442 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 MDP1Q86V88 176 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 OR1K1Q8NGR3 316 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 OR8S1Q8NH09 359 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 FCAMRQ8WWV6 532 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 GMPPAQ96IJ6 420 aaPredicted RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 GSX2Q9BZM3 304 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 DLL4Q9NR61 685 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 NKIRAS2Q9NYR9 191 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 MRPS28Q9Y2Q9 187 aaKnown RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 NUBP2Q9Y5Y2 271 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 GABARAPH6UMI1 98 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 GSTZ1O43708 216 aaPredicted RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 SS18L1O75177 396 aaPredicted RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 OR3A2P47893 321 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 GSK3AP49840 483 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 ACSF3Q4G176 576 aaPredicted RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 SPATA46Q5T0L3 261 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 CDH24Q86UP0 819 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 OR10Z1Q8NGY1 313 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 SSC4DQ8WTU2 575 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 BCL2L2Q92843 193 aaPredicted RBP12.96□□□□□ -0.33
MKS1-202ENST00000393119 HRASLSQ9HDD0 168 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 NUDT15Q9NV35 164 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 MED9Q9NWA0 146 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 KIF25Q9UIL4 384 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 PTPRQQ9UMZ3 2332 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 STARD10Q9Y365 291 aa12.96□□□□□ -0.33
MKS1-202ENST00000393119 CTDSPLO15194 276 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
MKS1-202ENST00000393119 LILRA1O75019 489 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 AGFG2O95081 481 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 MPIG6BO95866 241 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 GNB3P16520 340 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 SNTB2Q13425 540 aaKnown RBP12.95□□□□□ -0.34
MKS1-202ENST00000393119 RTL6Q6ICC9 239 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 OR52H1Q8NGJ2 320 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 OPN3Q9H1Y3 402 aaPredicted RBP12.95□□□□□ -0.34
MKS1-202ENST00000393119 ZNF222Q9UK12 451 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 ZNF175Q9Y473 711 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 MFSD2BA6NFX1 497 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 RAB27BO00194 218 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 SOCS1O15524 211 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 FAM87AP0C7U9 286 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 MPGP29372 298 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 WNT5AP41221 380 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 ZP1P60852 638 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 ECH1Q13011 328 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 GSG1Q2KHT4 349 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 PRR30Q53SZ7 412 aaPredicted RBP12.95□□□□□ -0.34
MKS1-202ENST00000393119 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 CHST4Q8NCG5 386 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 SARAFQ96BY9 339 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 CHST5Q9GZS9 411 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 GTF3C1Q12789 2109 aa12.95□□□□□ -0.34
MKS1-202ENST00000393119 hCG_38984A0A1B0GV85 526 aa12.94□□□□□ -0.34
MKS1-202ENST00000393119 TCRBP04435 133 aa12.94□□□□□ -0.34
MKS1-202ENST00000393119 GABRA1P14867 456 aa12.94□□□□□ -0.34
MKS1-202ENST00000393119 RBMXP38159 391 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms