RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CHP1Q99653 195 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 UQCC2Q9BRT2 126 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF649Q9BS31 505 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RDH14Q9HBH5 336 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 ZNF160Q9HCG1 818 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 CD209Q9NNX6 404 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 PARP11Q9NR21 331 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 HEBP1Q9NRV9 189 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 STX18Q9P2W9 335 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 RAB23Q9ULC3 237 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 CAB39Q9Y376 341 aaPredicted RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 SLC22A7Q9Y694 548 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 FN1P02751 2386 aaKnown RBP0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 PCDH15Q96QU1 1955 aa0.72□□□□□ -2.29
RNU6-541P-201ENST00000384709 NUMA1Q14980 2115 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 NINLQ9Y2I6 1382 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 MYH11P35749 1972 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 IGKV1OR2-108A0A075B7D4 117 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 GFAPP14136 432 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 EIF2S2P20042 333 aaKnown RBP0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 SERPINB8P50452 374 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 RPS15P62841 145 aaKnown RBP0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 INCA1Q0VD86 236 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 TRDNQ13061 729 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 KRTAP25-1Q3LHN0 102 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 FBXL19-AS1Q494R0 122 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 PYDC2Q56P42 97 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 LDLRAD2Q5SZI1 272 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 PRAMEF20Q5VT98 475 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 ZNF660Q6AZW8 331 aaPredicted RBP0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 SSX9Q7RTT3 188 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 COMTD1Q86VU5 262 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 CDH26Q8IXH8 852 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 DAW1Q8N136 415 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 GABRG1Q8N1C3 465 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 OR8K3Q8NH51 312 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 OR51F2Q8NH61 342 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 MUC7Q8TAX7 377 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 ACTL9Q8TC94 416 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 SFXN5Q8TD22 340 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 TMEM159Q96B96 161 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 SNF8Q96H20 258 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 OPALINQ96PE5 141 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 ALS2CR12Q96Q35 445 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 PLIN2Q99541 437 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 CCDC77Q9BR77 488 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 SLC7A5P2Q9GIP4 190 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 VSIRQ9H7M9 311 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 GEMIN7Q9H840 131 aaKnown RBP0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 HPCAL4Q9UM19 191 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 COL4A2P08572 1712 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 FLG2Q5D862 2391 aaPredicted RBP0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 COL4A1P02462 1669 aa0.71□□□□□ -2.3
RNU6-541P-201ENST00000384709 PLEKHG2Q9H7P9 1386 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 MROH5Q6ZUA9 1318 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 LOC102724200A0A096LPH7 203 aaPredicted RBP0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 A0A0B4J2E0 115 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 H3BQ85 93 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 BCKDKO14874 412 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 AGTP01019 485 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 PTHP01270 115 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 TEAD1P28347 426 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 UQCRFS1P47985 274 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 AP1S2P56377 157 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 CLDN18P56856 261 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RPS15AP62244 130 aaKnown RBP0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RPL18AQ02543 176 aaKnown RBP0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 TFDP2Q14188 446 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RPEL1Q2QD12 228 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 PDZD11Q5EBL8 140 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 TMPPEQ6ZT21 453 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RAB43Q86YS6 212 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 WDR31Q8NA23 367 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 OR4D6Q8NGJ1 314 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 OR52E5Q8NH55 327 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 ITFG1Q8TB96 612 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 ASZ1Q8WWH4 475 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RAB1CQ92928 201 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 MCUR1Q96AQ8 359 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 APH1AQ96BI3 265 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 JSRP1Q96MG2 331 aaPredicted RBP0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 CSPG4P5Q96PW8 444 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 PEBP4Q96S96 227 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 SND1-IT1Q9HBX3 110 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 MRPS30Q9NP92 439 aaKnown RBP0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 INIPQ9NRY2 104 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RAB22AQ9UL26 194 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 RTTNQ86VV8 2226 aa0.7□□□□□ -2.3
RNU6-541P-201ENST00000384709 TRPM3Q9HCF6 1732 aaPredicted RBP0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 PTPRBP23467 1997 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 A0A1W2PNM2 257 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 GMNCA6NCL1 334 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 IGLL5B9A064 214 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 UPK1AO00322 258 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 SLC31A1O15431 190 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 ZNF73O43830 326 aaPredicted RBP0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 FCN3O75636 299 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 CIB2O75838 187 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 UPK1BO75841 260 aa0.69□□□□□ -2.3
RNU6-541P-201ENST00000384709 ERCC1P07992 297 aaPredicted RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms