RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 COMMD4Q9H0A8 199 aa16.75■□□□□ 0.27
DDR1-228ENST00000376575 FN3KRPQ9HA64 309 aa16.75■□□□□ 0.27
DDR1-228ENST00000376575 WIPI2Q9Y4P8 454 aa16.75■□□□□ 0.27
DDR1-228ENST00000376575 CSPG4Q6UVK1 2322 aa16.75■□□□□ 0.27
DDR1-228ENST00000376575 ANKRD61A6NGH8 418 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 OR5B21A6NL26 309 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 PPIHO43447 177 aaKnown RBP16.74■□□□□ 0.27
DDR1-228ENST00000376575 LHBP01229 141 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 IGHV2-70P01814 119 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 USF1P22415 310 aaPredicted RBP16.74■□□□□ 0.27
DDR1-228ENST00000376575 RPS11P62280 158 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDR1-228ENST00000376575 GNG3P63215 75 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 SPHARQ15513 63 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 MOB3CQ70IA8 216 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 PARP16Q8N5Y8 322 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 GHSRQ92847 366 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 RNF170Q96K19 258 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 TECTBQ96PL2 329 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 OR51I2Q9H344 312 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 PLEKHA1Q9HB21 404 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 ZNF281Q9Y2X9 895 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 NPTNQ9Y639 398 aa16.74■□□□□ 0.27
DDR1-228ENST00000376575 ABCA1O95477 2261 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 PQLC2LA1A4F0 135 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 WNT9BO14905 357 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 HPS1Q92902 700 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 RAB1CQ92928 201 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 FGGYQ96C11 551 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 GPR173Q9NS66 373 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 UFSP2Q9NUQ7 469 aa16.73■□□□□ 0.27
DDR1-228ENST00000376575 IGKV1-9A0A0C4DH69 117 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 TRBV5-5A0A0J9YX44 114 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 LRP5LA4QPB2 252 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 LRRC30A6NM36 301 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ZNF732B4DXR9 585 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ALX3O95076 343 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 CYB5R3P00387 301 aaPredicted RBP16.72■□□□□ 0.27
DDR1-228ENST00000376575 GRPP07492 148 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 GPM6AP51674 278 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 TBCEQ15813 527 aaPredicted RBP16.72■□□□□ 0.27
DDR1-228ENST00000376575 YIF1BQ5BJH7 314 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 DMRTC1Q5HYR2 192 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 PLCXD3Q63HM9 321 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ZNF529Q6P280 563 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 WDR82Q6UXN9 313 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ZNF826PQ6ZT77 177 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 LRRC28Q86X40 367 aaPredicted RBP16.72■□□□□ 0.27
DDR1-228ENST00000376575 ZFP41Q8N8Y5 198 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 OR13C3Q8NGS6 347 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 GPR148Q8TDV2 347 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 TIMD4Q96H15 378 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 C1orf159Q96HA4 380 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ISYNA1Q9NPH2 558 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 RNF7Q9UBF6 113 aa16.72■□□□□ 0.27
DDR1-228ENST00000376575 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 ANK3Q12955 4377 aaKnown RBP16.71■□□□□ 0.27
DDR1-228ENST00000376575 GATBO75879 557 aaKnown RBP16.71■□□□□ 0.27
DDR1-228ENST00000376575 INHBBP09529 407 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 BTG1P62324 171 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 GPR50Q13585 617 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 ZMYND11Q15326 602 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 TMEM155Q4W5P6 130 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 ASPHD2Q6ICH7 369 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 C1orf87Q8N0U7 546 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 GCSAMQ8N6F7 178 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 SCCPDHQ8NBX0 429 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 MAPK1IP1LQ8NDC0 245 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 OR11L1Q8NGX0 322 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 OR10Z1Q8NGY1 313 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 C1orf123Q9NWV4 160 aa16.71■□□□□ 0.27
DDR1-228ENST00000376575 CDIPTO14735 213 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 SERPINA3P01011 423 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 CELP19835 753 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 EEF1B2P24534 225 aaKnown RBP16.7■□□□□ 0.26
DDR1-228ENST00000376575 MPZP25189 248 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 MAP2K4P45985 399 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 CHN2P52757 468 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 LMO4P61968 165 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 KRTAP1-1Q07627 177 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 TPBGQ13641 420 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 MED22Q15528 200 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 AVPI1Q5T686 147 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 PEG10Q86TG7 708 aaKnown RBP16.7■□□□□ 0.26
DDR1-228ENST00000376575 DNAAF1Q8NEP3 725 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 RPL3LQ92901 407 aaKnown RBP16.7■□□□□ 0.26
DDR1-228ENST00000376575 CCDC90BQ9GZT6 254 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 TMEM165Q9HC07 324 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 ACOT13Q9NPJ3 140 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 DHDHQ9UQ10 334 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 TLN2Q9Y4G6 2542 aa16.7■□□□□ 0.26
DDR1-228ENST00000376575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.7■□□□□ 0.267e-8■■■□□ 16.9
DDR1-228ENST00000376575 IGKV1-27A0A075B6S5 117 aa16.69■□□□□ 0.26
DDR1-228ENST00000376575 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.69■□□□□ 0.26
DDR1-228ENST00000376575 IRF2P14316 349 aa16.69■□□□□ 0.26
DDR1-228ENST00000376575 ATF1P18846 271 aa16.69■□□□□ 0.26
DDR1-228ENST00000376575 PCMT1P22061 227 aa16.69■□□□□ 0.26
DDR1-228ENST00000376575 FUT6P51993 359 aa16.69■□□□□ 0.26
DDR1-228ENST00000376575 EMX1Q04741 257 aaPredicted RBP16.69■□□□□ 0.26
DDR1-228ENST00000376575 TMEM249Q2WGJ8 235 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms