RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GPR61Q9BZJ8 451 aa14.82□□□□□ -0.04
PTCH1-201ENST00000331920 ING1Q9UK53 422 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 SOX21Q9Y651 276 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-201ENST00000331920 MFNGO00587 321 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 ELOBQ15370 118 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 AGBL4Q5VU57 503 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 AMMECR1LQ6DCA0 310 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 ZNF547Q8IVP9 402 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 FADS6Q8N9I5 356 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 GPR137Q96N19 417 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 IL36GQ9NZH8 169 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 DUSP5Q16690 384 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 BCORP1Q8N888 145 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 TAAR9Q96RI9 348 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 A4GNTQ9UNA3 340 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 TDRD6O60522 2096 aaKnown RBP14.81□□□□□ -0.04
PTCH1-201ENST00000331920 SLC35E2P0CK97 266 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 FAM181BA6NEQ2 426 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 LIMK1P53667 647 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 HLXQ14774 488 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-201ENST00000331920 HES3Q5TGS1 186 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 VRK3Q8IV63 474 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 TMEM99Q8N816 258 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 C1QTNF3Q9BXJ4 246 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 TECRQ9NZ01 308 aaKnown RBP14.81□□□□□ -0.04
PTCH1-201ENST00000331920 PLEKHB1Q9UF11 243 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-201ENST00000331920 IGHV3OR16-12A0A075B7B8 117 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 CLDN15P56746 228 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 GATA6Q92908 595 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 NEURL3Q96EH8 262 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 WDR89Q96FK6 387 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-201ENST00000331920 K7EQS6 105 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 AKR7A2O43488 359 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 ADAM20O43506 726 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 TSPAN13O95857 204 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 NKAIN1Q4KMZ8 207 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 NKAIN4Q8IVV8 208 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 MMP24Q9Y5R2 645 aa14.81□□□□□ -0.04
PTCH1-201ENST00000331920 IGHV3-43A0A0B4J1X8 118 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 C7orf72A4D263 438 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 ZNF815PA8K554 130 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 HOXC11O43248 304 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-201ENST00000331920 IGHV3-43DP0DP04 118 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 BSGP35613 385 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 HFEQ30201 348 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 D2HGDHQ8N465 521 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 GSX2Q9BZM3 304 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 TPRP12270 2363 aaKnown RBP14.8□□□□□ -0.04
PTCH1-201ENST00000331920 C9orf172C9J069 976 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 HTR3DQ70Z44 454 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 OR13F1Q8NGS4 319 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 DPH3P1Q9H4G8 78 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 MED29Q9NX70 200 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 IGKV3OR2-268A0A0C4DH90 116 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 PDPNQ86YL7 162 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 OR2G2Q8NGZ5 317 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 C1QBP02746 253 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 LYG2Q86SG7 212 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 CHAC2Q8WUX2 184 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.8□□□□□ -0.04
PTCH1-201ENST00000331920 HGDQ93099 445 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 ZNFX1Q9P2E3 1918 aaKnown RBP14.8□□□□□ -0.04
PTCH1-201ENST00000331920 ARNTLO00327 626 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 DDOSTP39656 456 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 FAM26EQ8N5C1 309 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 C10orf71Q711Q0 1435 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 TEAD3Q99594 435 aa14.8□□□□□ -0.04
PTCH1-201ENST00000331920 A0A1B0GTW7 788 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 M0R143 59 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 KLF13Q9Y2Y9 288 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-201ENST00000331920 PPLO60437 1756 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 MASP2O00187 686 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 BTF3P20290 206 aaKnown RBP14.79□□□□□ -0.04
PTCH1-201ENST00000331920 LIPAP38571 399 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 MOB4Q9Y3A3 225 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 RP1L1Q8IWN7 2480 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-201ENST00000331920 OOEPA6NGQ2 149 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 NID1P14543 1247 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 MGMTP16455 207 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 THBS4P35443 961 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 MICBQ29980 383 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 SGK494Q96LW2 274 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 SEC11CQ9BY50 192 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 CCL26Q9Y258 94 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 C3orf80F5H4A9 247 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 TMEM241Q24JQ0 296 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 SLC36A1Q7Z2H8 476 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 PTX4Q96A99 478 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 AUNIPQ9H7T9 357 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 RABAC1Q9UI14 185 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 FAHP16930 419 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 OR13H1Q8NG92 308 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 NPAS1Q99742 590 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 A6NDN8 102 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 KLK10O43240 276 aa14.79□□□□□ -0.04
PTCH1-201ENST00000331920 ARHGEF28Q8N1W1 1705 aaKnown RBP14.78□□□□□ -0.04
PTCH1-201ENST00000331920 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 GABRB1P18505 474 aa14.78□□□□□ -0.04
PTCH1-201ENST00000331920 MMP11P24347 488 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms