RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PMELP40967 661 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 SOX2P48431 317 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 PDLIM4P50479 330 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 DSCR9P59020 149 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 GNG3P63215 75 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 SSX1Q16384 188 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 ARMCX4Q5H9R4 360 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 CLEC2AQ6UVW9 174 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 MOGAT3Q86VF5 341 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 MS4A15Q8N5U1 240 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 WFDC11Q8NEX6 87 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 FAM168AQ92567 244 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 ERGIC1Q969X5 290 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 TMEM106AQ96A25 262 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 RNF170Q96K19 258 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 OR14A2Q96R54 314 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 DCAF16Q9NXF7 216 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 ITGB1BP2Q9UKP3 347 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 PPP1R3CQ9UQK1 317 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 OTOGQ6ZRI0 2925 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 CSMD1Q96PZ7 3565 aa13.54□□□□□ -0.24
LRRC28-202ENST00000331450 CR1P17927 2039 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 A0A087WXM4 84 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 IFNL4K9M1U5 179 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 NDUFS8O00217 210 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 INMTO95050 263 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 ALX3O95076 343 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 CD2P06729 351 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 SMIM18P0DKX4 95 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 RBMXP38159 391 aaKnown RBP13.53□□□□□ -0.24
LRRC28-202ENST00000331450 GPM6AP51674 278 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 CNN3Q15417 329 aaKnown RBP13.53□□□□□ -0.24
LRRC28-202ENST00000331450 HFEQ30201 348 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 SYT6Q5T7P8 510 aaPredicted RBP13.53□□□□□ -0.24
LRRC28-202ENST00000331450 UNQ9370/PRO34162Q6UXP9 181 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 SERPINA12Q8IW75 414 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 OR13C9Q8NGT0 318 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 ZNF420Q8TAQ5 688 aaPredicted RBP13.53□□□□□ -0.24
LRRC28-202ENST00000331450 THRSPQ92748 146 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 DERL3Q96Q80 235 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 HIST1H2AAQ96QV6 131 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 ZCCHC4Q9H5U6 513 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 TMEM106BQ9NUM4 274 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 NDUFB11Q9NX14 153 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
LRRC28-202ENST00000331450 IGHV4-30-2A0A087WSY4 118 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 LRP5LA4QPB2 252 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 ZNF879B4DU55 563 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 ZNF732B4DXR9 585 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 PIN1P1O15428 100 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 SERPINA3P01011 423 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 GRPP07492 148 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 ATF1P18846 271 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 FSTP19883 344 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.25
LRRC28-202ENST00000331450 RPS25P62851 125 aaKnown RBP13.52□□□□□ -0.25
LRRC28-202ENST00000331450 INSL4Q14641 139 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 KCTD8Q6ZWB6 473 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 DNAAF1Q8NEP3 725 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 CCL17Q92583 94 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 MUL1Q969V5 352 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 Q96MF0 132 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 TMED9Q9BVK6 235 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 OR51I2Q9H344 312 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 UFSP2Q9NUQ7 469 aa13.52□□□□□ -0.25
LRRC28-202ENST00000331450 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 IGKV1-27A0A075B6S5 117 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 A0A096LNT2 108 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TMEM178BH3BS89 294 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 SULT1B1O43704 296 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 GPX5O75715 221 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 IGFBP3P17936 291 aaPredicted RBP13.51□□□□□ -0.25
LRRC28-202ENST00000331450 PSMA1P25786 263 aaKnown RBP13.51□□□□□ -0.25
LRRC28-202ENST00000331450 PSMB9P28065 219 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 GABRA5P31644 462 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 CFHR2P36980 270 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 FUT6P51993 359 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 GP2P55259 537 aaKnown RBP13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TMEM33P57088 247 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TRAM1Q15629 374 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 NEDD8Q15843 81 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 CRIP3Q6Q6R5 217 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 WDR82Q6UXN9 313 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 SPNS3Q6ZMD2 512 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 ZNF826PQ6ZT77 177 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 SCCPDHQ8NBX0 429 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 OR5D14Q8NGL3 314 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TRMT10AQ8TBZ6 339 aaKnown RBP13.51□□□□□ -0.25
LRRC28-202ENST00000331450 NPRL2Q8WTW4 380 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 SPSB1Q96BD6 273 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 ORAI1Q96D31 301 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 C1orf123Q9NWV4 160 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TAS2R4Q9NYW5 299 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 SLC7A11Q9UPY5 501 aa13.51□□□□□ -0.25
LRRC28-202ENST00000331450 TRAV8-7A0A075B6U6 113 aa13.5□□□□□ -0.25
LRRC28-202ENST00000331450 A6NLC8 198 aa13.5□□□□□ -0.25
LRRC28-202ENST00000331450 CCRL2O00421 344 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms