RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SPSB1Q96BD6 273 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 MEGF10Q96KG7 1140 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 PAPOLGQ9BWT3 736 aaKnown RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 MRPS26Q9BYN8 205 aaKnown RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ZCCHC4Q9H5U6 513 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 C14orf119Q9NWQ9 140 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 OTOGQ6ZRI0 2925 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 ANXA2P2A6NMY6 339 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 F5H5P2 479 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 SPRY3O43610 288 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 NDUFS7O75251 213 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 UCHL1P09936 223 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 ATF1P18846 271 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 MPZP25189 248 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 GIFP27352 417 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 MAPK3P27361 379 aaPredicted RBP12.07□□□□□ -0.48
SSBP1-201ENST00000265304 TGFBR2P37173 567 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 FUT6P51993 359 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 GNG3P63215 75 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 TNFAIP6P98066 277 aaPredicted RBP12.07□□□□□ -0.48
SSBP1-201ENST00000265304 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.07□□□□□ -0.485e-19■■■■■ 32
SSBP1-201ENST00000265304 OR13C5Q8NGS8 318 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 RDH5Q92781 318 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 VRK1Q99986 396 aaPredicted RBP12.07□□□□□ -0.48
SSBP1-201ENST00000265304 MICU1Q9BPX6 476 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 ADAT1Q9BUB4 502 aaKnown RBP12.07□□□□□ -0.48
SSBP1-201ENST00000265304 OR51I2Q9H344 312 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 PLEKHA1Q9HB21 404 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 VCX3AQ9NNX9 186 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 GCM1Q9NP62 436 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 DLL4Q9NR61 685 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 FOXJ3Q9UPW0 622 aa12.07□□□□□ -0.48
SSBP1-201ENST00000265304 LHBP01229 141 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 PRKACBP22694 351 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 THBS2P35442 1172 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 RPS25P62851 125 aaKnown RBP12.06□□□□□ -0.48
SSBP1-201ENST00000265304 CCL8P80075 99 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 FABP5Q01469 135 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 NEDD8Q15843 81 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 GDPGP1Q6ZNW5 385 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 OR13F1Q8NGS4 319 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 YIPF6Q96EC8 236 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 OR14A2Q96R54 314 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 RTL8AQ9BWD3 113 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
SSBP1-201ENST00000265304 TPK1Q9H3S4 243 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 SAP30LQ9HAJ7 183 aa12.06□□□□□ -0.48
SSBP1-201ENST00000265304 PNMA8CA0A1B0GUJ8 204 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 LRP5LA4QPB2 252 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 TRIM64BA6NI03 449 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 A6NIN4 97 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 SULT1B1O43704 296 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 NOS1APO75052 506 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-201ENST00000265304 ZNF20P17024 532 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 PSMB9P28065 219 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 PMELP40967 661 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 ATP5J2P56134 94 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 TMEM33P57088 247 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 DSCR9P59020 149 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 ZNF154Q13106 437 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 RIN1Q13671 783 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 CNN3Q15417 329 aaKnown RBP12.05□□□□□ -0.48
SSBP1-201ENST00000265304 MOB3CQ70IA8 216 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 OR10Z1Q8NGY1 313 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 OR8S1Q8NH09 359 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 TSEN15Q8WW01 171 aaKnown RBP12.05□□□□□ -0.48
SSBP1-201ENST00000265304 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 RNF170Q96K19 258 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 TMED9Q9BVK6 235 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 VPS13CQ709C8 3753 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 ZANQ9Y493 2812 aa12.05□□□□□ -0.48
SSBP1-201ENST00000265304 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 IGKV1-27A0A075B6S5 117 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 TRAV8-7A0A075B6U6 113 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 IGHV1-69-2A0A0G2JMI3 117 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 MEGF11A6BM72 1044 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 ZNF732B4DXR9 585 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 H3BSH0 61 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 NDUFS8O00217 210 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 GABRPO00591 440 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 RGS9O75916 674 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-201ENST00000265304 CSF3P09919 207 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 DAOP14920 347 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 COL8A2P25067 703 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 SOX2P48431 317 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 INSL4Q14641 139 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 MPPED2Q15777 294 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 SHEQ5VZ18 495 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 PLCXD3Q63HM9 321 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms