RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zfp760E9QAF5 666 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Plscr5J3QM92 274 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Agr2O88312 175 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Hsd3b1P24815 373 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr13P34984 310 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cd244Q07763 397 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gnb3Q61011 340 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Slc35e3Q6PGC7 313 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Atxn7l2Q8C8K6 696 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lysmd4Q8CC84 293 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Eddm3bQ8K0E4 149 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cst10Q9JM84 148 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cdc34bA0A140T8I4 237 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Prr32A2AFE9 284 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ccl20O89093 97 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Timp2P25785 220 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Sft2d1Q5SSN7 159 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr198Q7TS40 306 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lrit3W8DXL4 681 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Zfp873A0A1B0GT64 667 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r180B9EK86 305 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ndufb11O09111 151 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Igk-V19-17P01633 149 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Wnt3P17553 355 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 McptlQ00356 246 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Defb43Q30KM9 69 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Muc20Q8BUE7 656 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lims2Q91XD2 341 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Abca15E9PWH4 1668 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm28285A0A087WQ54 102 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Emg1O35130 244 aaKnown RBP9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Adra1aP97718 466 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr259Q7TS20 312 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 DctdQ8K2D6 178 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r36Q8R2E3 305 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Nudt16l1Q8VHN8 211 aaKnown RBP9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lmntd1Q9D4C1 413 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Upk3aQ9JKX8 287 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vstm2bQ9JME9 285 aa9.26□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mtcl1Q3UHU5 1945 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 FocadA2AKG8 1798 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ighv16-1A0A0A6YW39 117 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r138D3YTY2 306 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm8693E9PW18 306 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm4498K9J7G4 306 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r118L7N273 306 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Adam10O35598 749 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Galnt2Q6PB93 570 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lrtm2Q8BGX3 370 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Scmh1Q8K214 706 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr167Q8VGJ5 312 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Arap2Q8BZ05 1703 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Igkv5-45A0A0B4J1J1 115 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm6096D3YTY6 151 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lrp3E9Q1T6 790 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r129E9QA94 307 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm8720K9J7F4 307 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ca6P18761 317 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Slc7a10P63115 530 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cd84Q18PI6 329 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lrrc30Q3UV48 300 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 H2-M10.3Q85ZW6 330 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Zfp947Q8BIQ6 437 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tox4Q8BU11 619 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1279Q8VF38 313 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1132Q8VG97 308 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr796Q8VGJ1 310 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Kcnd3Q9Z0V1 655 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm5890A0A140LI04 305 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ccdc71lE9Q4T4 218 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mep1aP28825 747 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Slc6a12P31651 614 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cnr1P47746 473 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Foxj1Q61660 421 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 LgalslQ8VED9 172 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Emid1Q91VF5 444 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Acy1Q99JW2 408 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Q99K99 313 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Fbp1Q9QXD6 338 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Bcl2P10417 236 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 AcrP23578 436 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr193Q7TS43 309 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Metap1Q8BP48 386 aaKnown RBP9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Slc35e1Q8CD26 409 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r42Q8VBS7 329 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1451Q8VFX5 310 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Kcnk5Q9JK62 502 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Wif1Q9WUA1 379 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr465-ps1A0A0U1RPZ4 315 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm14399A2ARW8 610 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm21818J3KMS6 170 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 FstP47931 344 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ube2nP61089 152 aaKnown RBP9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cyb561a3Q6P1H1 242 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Fbxw13Q8BI57 466 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Krtcap3Q8K177 240 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lgi3Q8K406 548 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr770Q8VGC2 311 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Q9CRW3 126 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 MeiobQ9D513 470 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms