RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Tpsb2P21845 276 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Pon3Q62087 354 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Igsf21Q7TNR6 468 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Exosc3Q7TQK4 274 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Acot4Q8BWN8 421 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 SinhcafQ8C8M1 221 aaKnown RBP15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Vmn1r229Q8R2A9 306 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Med25Q8VCB2 745 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Pdcd10Q8VE70 212 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr1495Q8VEZ4 319 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Fam210bQ9D8B6 190 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 PcntP48725 2898 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Cacna1dQ99246 2179 aa15.08■□□□□ 0
Ctcf-201ENSMUST00000005841 Ighg1P01869 393 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Dlx4P70436 240 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Ceacam19Q3TQ88 271 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Plpp1Q61469 283 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Glt8d1Q6NSU3 371 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Zfp790Q80ZX2 779 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 BanpQ8VBU8 548 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Mrpl28Q9D1B9 257 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Tnfsf14Q9QYH9 239 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Gm9573F7C950 1606 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Wdfy1E9Q4P1 410 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 PdynO35417 248 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Lmx1bO88609 395 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Vmn1r223Q5SSA0 361 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Q80X32 188 aaKnown RBP15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Lpar6Q8BMC0 344 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Ikzf4Q8C208 586 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Agbl3Q8CDP0 1006 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Rtn4rl1Q8K0S5 445 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Tcrg-V7A0A0A6YYE8 116 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 2410141K09RikK7N769 464 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Irgm1Q60766 409 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr479Q7TRV1 327 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Zar1Q80SU3 361 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 PccbQ99MN9 541 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Slc31a2Q9CPU9 143 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Pop4Q9CR08 221 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Gabra4Q9D6F4 552 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Clec3aQ9EPW4 196 aa15.07■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr576A0A0G2JFH3 312 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Vmn1r7E9Q8T0 311 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr13P34984 310 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Dnase2P56542 353 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Gmeb2P58929 530 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Hist1h2aaQ8CGP4 129 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Acer2Q8VD53 275 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Gins3Q9CY94 216 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Zfand6Q9DCH6 223 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Tmem176aQ9DCS1 244 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Dgat2Q9DCV3 388 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Itga5P11688 1053 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Rab18P35293 206 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Shc1P98083 579 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Trp53i11Q4QQM4 189 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Mettl7a2Q5I0W6 244 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Jazf1Q80ZQ5 243 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Mospd3Q8BGG6 235 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Spryd4Q91WK1 207 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Atp23Q9CWQ3 201 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Ndufaf3Q9JKL4 185 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 NsdhlQ9R1J0 362 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Sema4fQ9Z123 777 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Ctxnd2A0A1B0GQX3 59 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Skint7A7XV04 395 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Bet1O35623 118 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Zfp429Q7M6Y0 485 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr1087Q7TR63 313 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Zfand1Q8BFR6 268 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Dcp1aQ91YD3 602 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Dnajb11Q99KV1 358 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Hsbp1Q9CQZ1 76 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Enpp5Q9EQG7 477 aa15.06■□□□□ 0
Ctcf-201ENSMUST00000005841 Gm16368A0A1Y7VNG9 144 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Prrt1O35449 306 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Nfkbil1O88995 381 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 P01657 111 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Rab5bP61021 215 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Mogat2Q80W94 334 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Olfr777Q8VFH3 311 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Ch25hQ9Z0F5 298 aa15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Mecp2Q9Z2D6 484 aaKnown RBP15.05■□□□□ 0
Ctcf-201ENSMUST00000005841 Prr22F6TNE3 422 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm3033M0QWI0 180 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Gm3532M0QWL4 194 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Foxa1P35582 468 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 CpoxP36552 443 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Clec3bP43025 202 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Plekhm1Q7TSI1 1074 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Pgm2Q7TSV4 620 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Wdr48Q8BH57 676 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Mfsd4b1Q8VCV9 425 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Cdca4Q9CWM2 237 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Mrps34Q9JIK9 218 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 AsmtD3KU66 387 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Gp6P0C191 313 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Pax9P47242 342 aa15.05■□□□□ -0
Ctcf-201ENSMUST00000005841 Vax1Q2NKI2 338 aa15.05■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms