RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 PKD1L1Q8TDX9 2849 aa6.28□□□□□ -1.4
CUX1-219ENST00000606749 TRRAPQ9Y4A5 3859 aa6.27□□□□□ -1.4
CUX1-219ENST00000606749 A0A1B0GVI7 797 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 CLPSL1A2RUU4 121 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 ANXA2P2A6NMY6 339 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 PRR23D1E9PI22 279 aaPredicted RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 GNGT2O14610 69 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 GPR37O15354 613 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 NDUFB3O43676 98 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 SELENOFO60613 162 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 CST4P01036 141 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 IGHV4-59P01825 116 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 HMGN1P05114 100 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 LYNP07948 512 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 PRR23D2P0DMB1 279 aaPredicted RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 PRKACGP22612 351 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 HCCSP53701 268 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 RPL15P61313 204 aaKnown RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 PRDX4Q13162 271 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 IKZF1Q13422 519 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 SNCBQ16143 134 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 LRRC10Q5BKY1 277 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 STUMQ69YW2 141 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 METAP1DQ6UB28 335 aaPredicted RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 VMO1Q7Z5L0 202 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 LDLRAD3Q86YD5 345 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 CPOQ8IVL8 374 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 FAM216BQ8N7L0 139 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 ZNF454Q8N9F8 522 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 SCCPDHQ8NBX0 429 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 OR10Z1Q8NGY1 313 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 NPRL2Q8WTW4 380 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 WFDC12Q8WWY7 111 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 OR5P3Q8WZ94 311 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 PIGCQ92535 297 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 DYRK2Q92630 601 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 RPL3LQ92901 407 aaKnown RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 CCDC124Q96CT7 223 aaKnown RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 RNF170Q96K19 258 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 PKP2Q99959 881 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 MICU1Q9BPX6 476 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 DCTN5Q9BTE1 182 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 THTPAQ9BU02 230 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 RTL8AQ9BWD3 113 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 FGF23Q9GZV9 251 aaPredicted RBP6.27□□□□□ -1.41
CUX1-219ENST00000606749 WDR13Q9H1Z4 485 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 C1orf21Q9H246 121 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 DPAGT1Q9H3H5 408 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 ONECUT1Q9UBC0 465 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 KLHDC2Q9Y2U9 406 aa6.27□□□□□ -1.41
CUX1-219ENST00000606749 TMEM210A6NLX4 147 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 AQP12BA6NM10 295 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 PRODHO43272 600 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 GPR137BO60478 399 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 FAM107AO95990 144 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ACAA1P09110 424 aaPredicted RBP6.26□□□□□ -1.41
CUX1-219ENST00000606749 OSMP13725 252 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 SELLP14151 372 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ALOX5APP20292 161 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 SLC2A5P22732 501 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 DCTDP32321 178 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 DLX1P56177 255 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 KRTAP10-3P60369 221 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 GMFBP60983 142 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 DEFA6Q01524 100 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 OCLNQ16625 522 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 SLC35D3Q5M8T2 416 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 TMEM236Q5W0B7 351 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ZNF788Q6ZQV5 615 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 C17orf107Q6ZR85 190 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 C1orf122Q6ZSJ8 110 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 KCTD8Q6ZWB6 473 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 KRT74Q7RTS7 529 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 AQP12AQ8IXF9 295 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 HS3ST5Q8IZT8 346 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 FTMTQ8N4E7 242 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 Q8N7P7 452 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 CCDC197Q8NCU1 140 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 BBS1Q8NFJ9 593 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 OR8B12Q8NGG6 310 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 LINC01006Q8NI28 216 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ANGPTL6Q8NI99 470 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 C8orf46Q8TAG6 207 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 HPSE2Q8WWQ2 592 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 MED30Q96HR3 178 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 RAB3IPQ96QF0 476 aaPredicted RBP6.26□□□□□ -1.41
CUX1-219ENST00000606749 CITED1Q99966 193 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 DNTTIP1Q9H147 329 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 NIPAL2Q9H841 368 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ZNF556Q9HAH1 456 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ABCB9Q9NP78 766 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 SNTG1Q9NSN8 517 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 DNAJB11Q9UBS4 358 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 ZNF391Q9UJN7 358 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 FAM96BQ9Y3D0 163 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CUX1-219ENST00000606749 A0A0U1RQV5 110 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 TMEM269A0A1B0GVZ9 245 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 ACOD1A6NK06 481 aa6.25□□□□□ -1.41
CUX1-219ENST00000606749 RNASEK-C17orf49H0YIS7 233 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms