RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 ZNF823P16415 610 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ACKR3P25106 362 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HMGA2P52926 109 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 KRTAP10-11P60412 298 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ERVFRD-1P60508 538 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 TSPAN31Q12999 210 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HABP2Q14520 560 aaPredicted RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 LRRC75BQ2VPJ9 315 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 NSUN5P1Q3KNT7 163 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 NCR3LG1Q68D85 454 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 GLYATQ6IB77 296 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HACD2Q6Y1H2 254 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ARPINQ7Z6K5 226 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 NDUFA11Q86Y39 141 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 MKXQ8IYA7 352 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 LNX2Q8N448 690 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 SLC37A3Q8NCC5 494 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ZNRF1Q8ND25 227 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 PAPD5Q8NDF8 572 aaKnown RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR51L1Q8NGJ5 315 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR8D4Q8NGM9 314 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR4C13Q8NGP0 309 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR8S1Q8NH09 359 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR2T6Q8NHC8 308 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 RP9Q8TA86 221 aaKnown RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 FANK1Q8TC84 345 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HPSE2Q8WWQ2 592 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OR5P3Q8WZ94 311 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 H1FXQ92522 213 aaKnown RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 SGCDQ92629 289 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 RPL3LQ92901 407 aaKnown RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 SLAMF6Q96DU3 332 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 SDSLQ96GA7 329 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 MED30Q96HR3 178 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 AMELYQ99218 206 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 IFT27Q9BW83 186 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 FAM234AQ9H0X4 552 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 OPA3Q9H6K4 179 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 GORASP2Q9H8Y8 452 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 SP140LQ9H930 580 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ELL3Q9HB65 397 aaPredicted RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 CENPMQ9NSP4 180 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 IL20Q9NYY1 176 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 SLC25A10Q9UBX3 287 aaPredicted RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 FAM32AQ9Y421 112 aaKnown RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 N6AMT1Q9Y5N5 214 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 WI2-2373I1.2A0A1W2PRP0 233 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 A6NDX4 124 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR2AT4A6NND4 320 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 ZNF878C9JN71 531 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 GSTA4O15217 222 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 FBXO24O75426 580 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 RHBDL1O75783 438 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 GADD45GO95257 159 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 CST4P01036 141 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 CLUP10909 449 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 PSG2P11465 335 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 IGLL1P15814 213 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 ENTPD1P49961 510 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 RAB13P51153 203 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 BMXP51813 675 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 SLC25A1P53007 311 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 DLX6P56179 175 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 GMFBP60983 142 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 CD83Q01151 205 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 SPIBQ01892 262 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 TMEM200BQ69YZ2 307 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 ZNF770Q6IQ21 691 aaPredicted RBP4.93□□□□□ -1.62
VRK3-220ENST00000600259 PGBD2Q6P3X8 592 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 LHFPL4Q7Z7J7 247 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR4S1Q8NGB4 309 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR51G2Q8NGK0 314 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR5D13Q8NGL4 314 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR2T4Q8NH00 348 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR5K1Q8NHB7 308 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 GNPDA2Q8TDQ7 276 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 RNF133Q8WVZ7 376 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 FAM162AQ96A26 154 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 R3HDM4Q96D70 268 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 REEP6Q96HR9 211 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 PYURFQ96I23 114 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 LYZL4Q96KX0 146 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OCSTAMPQ9BR26 566 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 COPS4Q9BT78 406 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 ABHD6Q9BV23 337 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 CDCA4Q9BXL8 241 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 NPFFR1Q9GZQ6 430 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 OR51I2Q9H344 312 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 EGLN3Q9H6Z9 239 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 C19orf12Q9NSK7 152 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 FGFR1OP2Q9NVK5 253 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 MPC1Q9Y5U8 109 aa4.93□□□□□ -1.62
VRK3-220ENST00000600259 TRBV23-1A0A0A0MS06 115 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 NKX6-3A6NJ46 265 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 TMEM210A6NLX4 147 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 ZNF850A8MQ14 1090 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 TBX1O43435 398 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 ANGPTL7O43827 346 aa4.92□□□□□ -1.62
VRK3-220ENST00000600259 MTRF1O75570 445 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms