RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 CST4P01036 141 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 CRYBA1P05813 215 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 HKR1P10072 659 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 SLC2A5P22732 501 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ACKR3P25106 362 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 FASP25445 335 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 CFHR2P36980 270 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 BPIFB3P59826 476 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ACTR3P61158 418 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ESRRGP62508 458 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 IKZF1Q13422 519 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 SLC9A3R2Q15599 337 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 DEFB112Q30KQ8 113 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 LRRC10Q5BKY1 277 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 C1orf146Q5VVC0 180 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 TEX36Q5VZQ5 186 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 MOB3CQ70IA8 216 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 THAP5Q7Z6K1 395 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 AMIGO2Q86SJ2 522 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ZDHHC13Q8IUH4 622 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ZDHHC23Q8IYP9 409 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 TCEANCQ8N8B7 351 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 SCCPDHQ8NBX0 429 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 OR5P3Q8WZ94 311 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 RPL3LQ92901 407 aaKnown RBP7.47□□□□□ -1.21
LMO3-222ENST00000540445 UTP4Q969X6 686 aaKnown RBP7.47□□□□□ -1.21
LMO3-222ENST00000540445 ITPKCQ96DU7 683 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 SEH1LQ96EE3 360 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 LYZL4Q96KX0 146 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
LMO3-222ENST00000540445 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 PKP2Q99959 881 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 SNTG1Q9NSN8 517 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 KAAG1Q9UBP8 84 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 ZNF391Q9UJN7 358 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 IKZF2Q9UKS7 526 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 GTF2A1LQ9UNN4 478 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 AP4S1Q9Y587 144 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 PCDHGB1Q9Y5G3 927 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 TMEM14AQ9Y6G1 99 aa7.47□□□□□ -1.21
LMO3-222ENST00000540445 CENPVL3A0A0U1RRI6 287 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ZNF816-ZNF321PA0A0X1KG74 233 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ACOD1A6NK06 481 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 TMEM210A6NLX4 147 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ZNF732B4DXR9 585 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 AKR7A2O43488 359 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 MITFO75030 526 aaPredicted RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 ZNF254O75437 659 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 RNASE1P07998 156 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 GABRA2P47869 451 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 GPM6AP51674 278 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 RIDAP52758 137 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 CXCR4P61073 352 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ELF3P78545 371 aaPredicted RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 RIPPLY1Q0D2K3 151 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 PDCD1Q15116 288 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ATP6AP1Q15904 470 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 DMRTC1Q5HYR2 192 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 WDR38Q5JTN6 314 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 CEP78Q5JTW2 689 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 RUSC1-AS1Q66K80 236 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 FAHD1Q6P587 224 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 C16orf87Q6PH81 154 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 DEGS2Q6QHC5 323 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 PDZD9Q8IXQ8 264 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ZNF679Q8IYX0 411 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 FAM216BQ8N7L0 139 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 SGMS2Q8NHU3 365 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ZNF671Q8TAW3 534 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 GATAD2BQ8WXI9 593 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ASB17Q8WXJ9 295 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 LHX4Q969G2 390 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 FAM71F1Q96KD3 344 aaPredicted RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 IL4I1Q96RQ9 567 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 CNN2Q99439 309 aaKnown RBP7.46□□□□□ -1.22
LMO3-222ENST00000540445 PBOV1Q9GZY1 135 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 WDR13Q9H1Z4 485 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 HAO2Q9NYQ3 351 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 PIGLQ9Y2B2 252 aa7.46□□□□□ -1.22
LMO3-222ENST00000540445 A0A0U1RQV5 110 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 A0A1B0GW55 424 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 CCDC182A6NF36 153 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 NKX6-3A6NJ46 265 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 SLC22A31A6NKX4 558 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 SRRM5B3KS81 715 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 ZNF670-ZNF695F2Z2N8 137 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 CLDN34H7C241 214 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 M0R129 80 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 GPR37O15354 613 aa7.45□□□□□ -1.22
LMO3-222ENST00000540445 MAGEB4O15481 346 aaPredicted RBP7.45□□□□□ -1.22
LMO3-222ENST00000540445 MTRF1O75570 445 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms