RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 NUP54Q7Z3B4 507 aa12.57□□□□□ -0.4
USP48-213ENST00000529637 SLAMF9Q96A28 289 aa12.57□□□□□ -0.4
USP48-213ENST00000529637 C8orf44Q96CB5 159 aa12.57□□□□□ -0.4
USP48-213ENST00000529637 C14orf144Q96I85 54 aa12.57□□□□□ -0.4
USP48-213ENST00000529637 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
USP48-213ENST00000529637 SHISA8B8ZZ34 492 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 C1QL1O75973 258 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 IGLV3-19P01714 112 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 SFTPBP07988 381 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 LYL1P12980 280 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 TMEM268Q5VZI3 342 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 DCXRQ7Z4W1 244 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 OR13C9Q8NGT0 318 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 NUDT22Q9BRQ3 303 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 SLC26A1Q9H2B4 701 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 MED29Q9NX70 200 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 FLVCR1Q9Y5Y0 555 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 P2RY10O00398 339 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 DUX1O43812 170 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 MT-ATP6P00846 226 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 P2RY4P51582 365 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 FBXW4P57775 412 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 POU3F1Q03052 451 aaPredicted RBP12.56□□□□□ -0.4
USP48-213ENST00000529637 GRINAQ7Z429 371 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 PLXDC1Q8IUK5 500 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 OR1N1Q8NGS0 311 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 RAB3CQ96E17 227 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
USP48-213ENST00000529637 EMC6Q9BV81 110 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 EIF5A2Q9GZV4 153 aaKnown RBP12.56□□□□□ -0.4
USP48-213ENST00000529637 GPR132Q9UNW8 380 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 CXorf65A6NEN9 183 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 TSPAN2O60636 221 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 SFT2D2O95562 160 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 CD37P11049 281 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 GLRA1P23415 457 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 PMELP40967 661 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 C1orf100Q5SVJ3 147 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 FIP1L1Q6UN15 594 aaKnown RBP12.56□□□□□ -0.4
USP48-213ENST00000529637 COX15Q7KZN9 410 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 COMMD2Q86X83 199 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 MEGF10Q96KG7 1140 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 PIGQQ9BRB3 760 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
USP48-213ENST00000529637 STARD10Q9Y365 291 aa12.56□□□□□ -0.4
USP48-213ENST00000529637 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 ST8SIA5O15466 376 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 FGGYQ96C11 551 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 FBXL17Q9UF56 701 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 SUSD2Q9UGT4 822 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 HHLA2Q9UM44 414 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 POLR1DQ9Y2S0 133 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 TMEM131Q92545 1883 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 IGHV1OR21-1A0A087WYE8 117 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 A0A0A6YYH2 397 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 A6NJ64 397 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 H7C1Q1 480 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 SDCBPO00560 298 aaPredicted RBP12.55□□□□□ -0.4
USP48-213ENST00000529637 PLPP3O14495 311 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
USP48-213ENST00000529637 TSPAN15O95858 294 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 FSTP19883 344 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 ITGA3P26006 1051 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 CRABP1P29762 137 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 CLDN6P56747 220 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 TLE3Q04726 772 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 ZNF616Q08AN1 781 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 GUK1Q16774 197 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 ZNF565Q8N9K5 539 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 POC1AQ8NBT0 407 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 THRSPQ92748 146 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 JSRP1Q96MG2 331 aaPredicted RBP12.55□□□□□ -0.4
USP48-213ENST00000529637 CDC6Q99741 560 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 PRDM13Q9H4Q3 707 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 TUBA4BQ9H853 241 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 RAB22AQ9UL26 194 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 MMP24Q9Y5R2 645 aa12.55□□□□□ -0.4
USP48-213ENST00000529637 IGLV1-36A0A0B4J1U3 117 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 LOC390937A0A1W2PQ73 354 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 A0A1W2PR77 199 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 OR13C7P0DN81 318 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 SNCAP37840 140 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 NDUFA6P56556 154 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 IL15RAQ13261 267 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
USP48-213ENST00000529637 PDZD11Q5EBL8 140 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 OR52N5Q8NH56 324 aa12.54□□□□□ -0.4
USP48-213ENST00000529637 GTF3AQ92664 365 aaKnown RBP12.54□□□□□ -0.4
USP48-213ENST00000529637 FOXQ1Q9C009 403 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms