RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CLDN22Q8N7P3 220 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 HSD17B11Q8NBQ5 300 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 KBTBD8Q8NFY9 601 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR11H1Q8NG94 326 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR4K17Q8NGC6 315 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR11H2Q8NH07 326 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 OR56B4Q8NH76 319 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 Q8TCH9 128 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 LINC00476Q8WZB0 136 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 IMP4Q96G21 291 aaKnown RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 SCMH1Q96GD3 660 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ALKBH3Q96Q83 286 aaPredicted RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 ZNF717Q9BY31 904 aaPredicted RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 C11orf49Q9H6J7 331 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 ZNF442Q9H7R0 627 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 PLAC1Q9HBJ0 212 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 FAM206AQ9NX38 181 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 SLC7A11Q9UPY5 501 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 SNX10Q9Y5X0 201 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 KTN1Q86UP2 1357 aaKnown RBP3.7□□□□□ -1.82
CD44-213ENST00000525209 CACNA1FO60840 1977 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 TAF1LQ8IZX4 1826 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 CRYBG1Q9Y4K1 1723 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 PIK3C2GO75747 1445 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 CCDC171Q6TFL3 1326 aa3.7□□□□□ -1.82
CD44-213ENST00000525209 NHSQ6T4R5 1651 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 NID2Q14112 1375 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 LOC100131303A0A0U1RQF7 123 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 A6NDN8 102 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ANKRD65E5RJM6 399 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SLC31A2O15432 143 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ZNF623O75123 536 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 BCAR3O75815 825 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 EIF3GO75821 320 aaKnown RBP eCLIP3.69□□□□□ -1.82
CD44-213ENST00000525209 SEC24AO95486 1093 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 HPRT1P00492 218 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SEMG1P04279 462 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PCCAP05165 728 aaPredicted RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 FRMD6-AS1P0C7T7 363 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SNHG28P0DPA3 235 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 CDH1P12830 882 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 GPD1P21695 349 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 WARSP23381 471 aaKnown RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 RPL12P30050 165 aaKnown RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 GALR1P47211 349 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 HOXA1P49639 335 aaPredicted RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 RAB7AP51149 207 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 RORCP51449 518 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SUB1P53999 127 aaKnown RBP eCLIP3.69□□□□□ -1.82
CD44-213ENST00000525209 RAB38P57729 211 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 IL5RAQ01344 420 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 CD300CQ08708 224 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ZNF235Q14590 738 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PTGR1Q14914 329 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ZNF169Q14929 603 aaPredicted RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 CEACAM21Q3KPI0 293 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SLC25A35Q3KQZ1 300 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ZNF790Q6PG37 636 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 WDR74Q6RFH5 385 aaPredicted RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 SH2D5Q6ZV89 423 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 OLIG3Q7RTU3 272 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 RBM23Q86U06 439 aaKnown RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 C10orf107Q8IVU9 208 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PRR22Q8IZ63 422 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 GATD1Q8NB37 220 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 SMRP1Q8NCR6 262 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 OR52B6Q8NGF0 335 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 COQ8AQ8NI60 647 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PCNPQ8WW12 178 aaKnown RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ZMYND19Q96E35 227 aaPredicted RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 MRAP2Q96G30 205 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PAGE5Q96GU1 130 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 RARRES2Q99969 163 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 AIF1LQ9BQI0 150 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 C20orf144Q9BQM9 153 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 PECRQ9BY49 303 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 KRTAP4-5Q9BYR2 181 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 OR51J1Q9H342 316 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 UGT1A8Q9HAW9 530 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ARMC1Q9NVT9 282 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 VPS29Q9UBQ0 182 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 KLK11Q9UBX7 282 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 RWDD2AQ9UIY3 292 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 ARHGEF28Q8N1W1 1705 aaKnown RBP3.69□□□□□ -1.82
CD44-213ENST00000525209 KCPQ6ZWJ8 1503 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 CACNA1SQ13698 1873 aa3.69□□□□□ -1.82
CD44-213ENST00000525209 RGPD2P0DJD1 1756 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 PEAK1Q9H792 1746 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TGIF2-C20orf24A0A0A6YYL0 155 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 IGHV2OR16-5A0A0B4J2B6 119 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR6C6A6NF89 314 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 CEACAM18A8MTB9 384 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZNF878C9JN71 531 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 F5H5K5 113 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms