RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NDUFA13Q9P0J0 144 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 GPR160Q9UJ42 338 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 DSCAMO60469 2012 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 TRAV8-7A0A075B6U6 113 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 TRAV1-2A0A0B4J238 106 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 IGKV1-9A0A0C4DH69 117 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 PLSCR5A0PG75 271 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 A6NHS1 94 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 ZNF850A8MQ14 1090 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 SULT1B1O43704 296 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 ATF1P18846 271 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 CA6P23280 308 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 LSM3P62310 102 aaKnown RBP10.68□□□□□ -0.7
PDPN-210ENST00000513143 DTX2Q86UW9 622 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 ZDHHC23Q8IYP9 409 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 OR1M1Q8NGA1 313 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 OR13C9Q8NGT0 318 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 OR13G1Q8NGZ3 307 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 ISOC1Q96CN7 298 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 CLEC4MQ9H2X3 399 aaPredicted RBP10.68□□□□□ -0.7
PDPN-210ENST00000513143 PLEKHF2Q9H8W4 249 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 TCF7L1Q9HCS4 588 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 ABCB9Q9NP78 766 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 BATF3Q9NR55 127 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 GPR173Q9NS66 373 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 SNTG1Q9NSN8 517 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 FAIMQ9NVQ4 179 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 CKLFQ9UBR5 152 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 NOP16Q9Y3C1 178 aaKnown RBP10.68□□□□□ -0.7
PDPN-210ENST00000513143 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
PDPN-210ENST00000513143 LRBAP50851 2863 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 SHISA3A0PJX4 238 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 ZSCAN5BA6NJL1 495 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 ZNF701M0R085 212 aaPredicted RBP10.67□□□□□ -0.7
PDPN-210ENST00000513143 MLNRO43193 412 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 DANCRP0C864 163 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 RAB3AP20336 220 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 MYL9P24844 172 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 TGFBR1P36897 503 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 ALDH3B1P43353 468 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 MTNR1BP49286 362 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 ZNF81P51508 661 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 VBP1P61758 197 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 NCS1P62166 190 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 PPP3R1P63098 170 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 NKPD1Q17RQ9 610 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 CEACAM21Q3KPI0 293 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 CEP78Q5JTW2 689 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 AGAP6Q5VW22 663 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 PLCXD3Q63HM9 321 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 MOB3CQ70IA8 216 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 LRRTM1Q86UE6 522 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 OR51A2Q8NGJ7 313 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 OR5P3Q8WZ94 311 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 GTF3AQ92664 365 aaKnown RBP10.67□□□□□ -0.7
PDPN-210ENST00000513143 ITPKCQ96DU7 683 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 TMEM138Q9NPI0 162 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 CBLN4Q9NTU7 201 aa10.67□□□□□ -0.7
PDPN-210ENST00000513143 FBXO9Q9UK97 447 aaPredicted RBP10.67□□□□□ -0.7
PDPN-210ENST00000513143 CHD3Q12873 2000 aaKnown RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 MEGF11A6BM72 1044 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 CCDC160A6NGH7 325 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ANXA2P2A6NMY6 339 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 H0YL77 283 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 H3BMQ9 156 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 M0R233 179 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 SLC22A1O15245 554 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 NOL3O60936 208 aaKnown RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 CD8AP01732 235 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 MAS1P04201 325 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ALDOBP05062 364 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 SOD3P08294 240 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ADH4P08319 380 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 CD37P11049 281 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 PRF1P14222 555 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ADRA2CP18825 462 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 PRKACBP22694 351 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 BDKRB2P30411 391 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 SDC2P34741 201 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 CNN3Q15417 329 aaKnown RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 OR8G1Q15617 311 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 DMRTC1Q5HYR2 192 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 TPRA1Q86W33 373 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 SPERTQ8NA61 448 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 DNAAF1Q8NEP3 725 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 OR5A2Q8NGI9 324 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 HPSE2Q8WWQ2 592 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 DVL3Q92997 716 aaPredicted RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 SPSB1Q96BD6 273 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 DGCR14Q96DF8 476 aaKnown RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 HIST1H2AAQ96QV6 131 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ADAT1Q9BUB4 502 aaKnown RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 TRAF4Q9BUZ4 470 aaPredicted RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 FGF23Q9GZV9 251 aaPredicted RBP10.66□□□□□ -0.7
PDPN-210ENST00000513143 MS4A5Q9H3V2 200 aa10.66□□□□□ -0.7
PDPN-210ENST00000513143 ZDHHC8Q9ULC8 765 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms