RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 DHRS3O75911 302 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 IGHV1-46P01743 117 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 IGHV4-39P01824 125 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 UCHL1P09936 223 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 PAX1P15863 534 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 MAGEB1P43366 347 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 PTH2RP49190 550 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 VBP1P61758 197 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 NCS1P62166 190 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 HSD17B12Q53GQ0 312 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 TMEM91Q6ZNR0 172 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 PLPP7Q8NBV4 271 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 OR13C5Q8NGS8 318 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 PERPQ96FX8 193 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 SLC30A2Q9BRI3 323 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 CYSLTR2Q9NS75 346 aa11.09□□□□□ -0.63
VPS33A-202ENST00000451053 CGGBP1Q9UFW8 167 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-202ENST00000451053 FBXO9Q9UK97 447 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-202ENST00000451053 ABCA12Q86UK0 2595 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 MLNRO43193 412 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 LMX1BO60663 402 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 NCR1O76036 304 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 LY6HO94772 140 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 ZNF20P17024 532 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 CA6P23280 308 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
VPS33A-202ENST00000451053 MAP2K3P46734 347 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 SOX2P48431 317 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 MTNR1BP49286 362 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 ATP5J2P56134 94 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 SPRNQ5BIV9 151 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 Q6ZSR3 168 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 OR10AD1Q8NGE0 317 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 OR14K1Q8NGZ2 314 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 OR10AC1Q8NH08 325 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 DVL3Q92997 716 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-202ENST00000451053 TRMT61AQ96FX7 289 aaKnown RBP11.08□□□□□ -0.64
VPS33A-202ENST00000451053 RAB1BQ9H0U4 201 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 DCSTAMPQ9H295 470 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 PPP1R3EQ9H7J1 279 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-202ENST00000451053 RHBDD3Q9Y3P4 386 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 APCP25054 2843 aa11.08□□□□□ -0.64
VPS33A-202ENST00000451053 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 PDCD5O14737 125 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 IL1AP01583 271 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 ADH4P08319 380 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 FAHP16930 419 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 FSTP19883 344 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 DDOSTP39656 456 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 SERPINB10P48595 397 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 CCL8P80075 99 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 RIPPLY1Q0D2K3 151 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 INSL4Q14641 139 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 SERPINA12Q8IW75 414 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 FTMTQ8N4E7 242 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 SEMA6DQ8NFY4 1073 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 OR2Z1Q8NG97 314 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 OR13G1Q8NGZ3 307 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 ELMOD3Q96FG2 381 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 PAPOLGQ9BWT3 736 aaKnown RBP11.07□□□□□ -0.64
VPS33A-202ENST00000451053 TCF7L1Q9HCS4 588 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 NOX4Q9NPH5 578 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 SNTG1Q9NSN8 517 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 TMEM100Q9NV29 134 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 MRPL15Q9P015 296 aaKnown RBP11.07□□□□□ -0.64
VPS33A-202ENST00000451053 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 FOXJ3Q9UPW0 622 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 PIGLQ9Y2B2 252 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 V9GYS6 101 aa11.07□□□□□ -0.64
VPS33A-202ENST00000451053 CENPEQ02224 2701 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 ZNF816-ZNF321PA0A0X1KG74 233 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 TRIM64BA6NI03 449 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 A6NIN4 97 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 ANKRD30BLA7E2S9 258 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 F5H5P2 479 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 CDRT1O95170 752 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 HPXP02790 462 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 ERCC1P07992 297 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-202ENST00000451053 GNALP38405 381 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 PSMD7P51665 324 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 EFNA4P52798 201 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 PPP3R1P63098 170 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-202ENST00000451053 SPCS2Q15005 226 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 PCGF3Q3KNV8 242 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 LRRC75A-AS1Q8N1F1 130 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
VPS33A-202ENST00000451053 OR5D14Q8NGL3 314 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms