RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 STARD6P59095 220 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 RNF212Q495C1 297 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 OR5H2Q8NGV7 314 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 PFDN5Q99471 154 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 NUDT22Q9BRQ3 303 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 SCRT1Q9BWW7 348 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 TWSG1Q9GZX9 223 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 WNT16Q9UBV4 365 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 TMED7-TICAM2A0A0A6YYA0 188 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 K7EPK0 472 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 AP4M1O00189 453 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 BPNT1O95861 308 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 PTGER4P35408 488 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 FAM71E2Q8N5Q1 922 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 WDSUB1Q8N9V3 476 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 OR5B2Q96R09 309 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 FAM206AQ9NX38 181 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 EHFQ9NZC4 300 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 NOSIPQ9Y314 301 aaKnown RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 MMP24Q9Y5R2 645 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 IGKV1D-8A0A087WSZ0 117 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 UMAD1C9J7I0 102 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 CRTAPO75718 401 aaPredicted RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 FBP1P09467 338 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 HIST1H1DP16402 221 aaKnown RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 HSD11B1P28845 292 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 THBS4P35443 961 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 SNCAP37840 140 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 IGLV3-21P80748 117 aaPredicted RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 FOXK1P85037 733 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 RSPO4Q2I0M5 234 aaPredicted RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 C1orf140Q5VVS0 124 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 OOSP2Q86WS3 158 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 OR9K2Q8NGE7 335 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 PBOV1Q9GZY1 135 aa11.97□□□□□ -0.49
PCNX3-202ENST00000439247 MRPS28Q9Y2Q9 187 aaKnown RBP11.97□□□□□ -0.49
PCNX3-202ENST00000439247 ATXN7O15265 892 aaPredicted RBP11.96□□□□□ -0.49
PCNX3-202ENST00000439247 CST4P01036 141 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 IFI6P09912 130 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 RNF224P0DH78 156 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 PAX6P26367 422 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 C16orf47Q6ZP98 133 aaPredicted RBP11.96□□□□□ -0.49
PCNX3-202ENST00000439247 OR10S1Q8NGN2 331 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
PCNX3-202ENST00000439247 DUSP15Q9H1R2 295 aaPredicted RBP11.96□□□□□ -0.49
PCNX3-202ENST00000439247 NCOR1O75376 2440 aa11.96□□□□□ -0.49
PCNX3-202ENST00000439247 MASP2O00187 686 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 XRCC2O43543 280 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 DXOO77932 396 aaKnown RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 SEMA4FO95754 770 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 OPN1LWP04000 364 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 OR1D4P47884 311 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 OR3A2P47893 321 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 CSNK2A1P68400 391 aaPredicted RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 TSC22D1Q15714 1073 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 PDZD11Q5EBL8 140 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 C1QL2Q7Z5L3 287 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 C19orf47Q8N9M1 422 aaKnown RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 APCDD1LQ8NCL9 501 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 CSNK2A3Q8NEV1 391 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 TSTD1Q8NFU3 115 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 MRPL24Q96A35 216 aaKnown RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 FAM71F1Q96KD3 344 aaPredicted RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 CCNL2Q96S94 520 aaPredicted RBP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 RARRES2Q99969 163 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 CNTNAP3Q9BZ76 1288 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 WFDC1Q9HC57 220 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 ZNF319Q9P2F9 582 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 STARD10Q9Y365 291 aa11.96□□□□□ -0.5
PCNX3-202ENST00000439247 PUS1Q9Y606 427 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCNX3-202ENST00000439247 SHISA8B8ZZ34 492 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 YKT6O15498 198 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 CDC14BO60729 498 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 GP1BBP13224 206 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 FPR2P25090 351 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 ITGA3P26006 1051 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 GPX4P36969 197 aaPredicted RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 SNU13P55769 128 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 ACY1Q03154 408 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 SP6Q3SY56 376 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 Q6ZSR6 202 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 SLAMF6Q96DU3 332 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 MARS2Q96GW9 593 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 PRODH2Q9UF12 536 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 C5orf63A6NC05 138 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 IFNA2P01563 188 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 IGHV4-34P06331 123 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 HTR5AP47898 357 aa11.95□□□□□ -0.5
PCNX3-202ENST00000439247 CSNK1EP49674 416 aaKnown RBP11.95□□□□□ -0.5
PCNX3-202ENST00000439247 EFNA3P52797 238 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms