RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 MAP2K3P46734 347 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 PRSS12P56730 875 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 NKX6-1P78426 367 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SNTB2Q13425 540 aaKnown RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SLC22A25Q6T423 547 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 UNQ6126/PRO20091Q6UXV3 157 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 DOK3Q7L591 496 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 PLPP7Q8NBV4 271 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SLC25A40Q8TBP6 338 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 AKAP1Q92667 903 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 OR14A2Q96R54 314 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SPOCK3Q9BQ16 436 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 OR2J1Q9GZK6 312 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 ZNF391Q9UJN7 358 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SPEF1Q9Y4P9 236 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 NBPF19A0A087WUL8 3843 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 CENPXA8MT69 81 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 LMX1BO60663 402 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SC5DO75845 299 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SLC2A2P11168 524 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 SOX2P48431 317 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 FAM3AP98173 230 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 ZFP69Q49AA0 526 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 ACSM3Q53FZ2 586 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 ADAM5Q6NVV9 412 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 MZT2BQ6NZ67 158 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 TPRA1Q86W33 373 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 TSEN15Q8WW01 171 aaKnown RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 MARS2Q96GW9 593 aaKnown RBP15.28■□□□□ 0.04
CCDC78-201ENST00000293889 MMP28Q9H239 520 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 COMMD3Q9UBI1 195 aa15.28■□□□□ 0.04
CCDC78-201ENST00000293889 DCHS2Q6V1P9 2916 aa15.27■□□□□ 0.04
CCDC78-201ENST00000293889 CELSR2Q9HCU4 2923 aa15.27■□□□□ 0.04
CCDC78-201ENST00000293889 hCG_38984A0A1B0GV85 526 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 ZNF879B4DU55 563 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 HPGDSO60760 199 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 SERPINA3P01011 423 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 CD3EP07766 207 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 LOXP28300 417 aaPredicted RBP15.27■□□□□ 0.03
CCDC78-201ENST00000293889 GSK3AP49840 483 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 NKX2-5P52952 324 aaPredicted RBP15.27■□□□□ 0.03
CCDC78-201ENST00000293889 Q499Y3 187 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 UNQ9370/PRO34162Q6UXP9 181 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 Q6ZSR3 168 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 PGAP1Q75T13 922 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 MRPL21Q7Z2W9 205 aaKnown RBP15.27■□□□□ 0.03
CCDC78-201ENST00000293889 CEACAM19Q7Z692 300 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 TCTE3Q8IZS6 198 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 Q8N402 240 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 OR13C3Q8NGS6 347 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 OR14K1Q8NGZ2 314 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 CAPSLQ8WWF8 208 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 TMEM165Q9HC07 324 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 DHDHQ9UQ10 334 aa15.27■□□□□ 0.03
CCDC78-201ENST00000293889 CENPEQ02224 2701 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 LOC390937A0A1W2PQ73 354 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 ANKRD61A6NGH8 418 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 SHISA9B4DS77 424 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 MTRF1O75570 445 aaKnown RBP15.26■□□□□ 0.03
CCDC78-201ENST00000293889 DHRS3O75911 302 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 TUBG1P23258 451 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 GLRXP35754 106 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 TNK1Q13470 666 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 CDK10Q15131 360 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 TRIQKQ629K1 86 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 ZNF787Q6DD87 383 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 FBXW12Q6X9E4 464 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 C1orf174Q8IYL3 243 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 C19orf18Q8NEA5 215 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 NUP37Q8NFH4 326 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 ENKURQ8TC29 256 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 KLF14Q8TD94 323 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-201ENST00000293889 CMBLQ96DG6 245 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 PIK3IP1Q96FE7 263 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 HS3ST6Q96QI5 342 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 MARVELD1Q9BSK0 173 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 TUBG2Q9NRH3 451 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 CYSLTR2Q9NS75 346 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 ATP23Q9Y6H3 246 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 V9GYS6 101 aa15.26■□□□□ 0.03
CCDC78-201ENST00000293889 A0A0B4J293 547 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 A0A1W2PPK0 400 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 COX6B1P14854 86 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 ACKR3P25106 362 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 THBS4P35443 961 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 MPV17P39210 176 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 CAV3P56539 151 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 OR8B8Q15620 311 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 MSMPQ1L6U9 139 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 FAM27D1Q5T7N8 215 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 HACD4Q5VWC8 232 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 RGS7BPQ6MZT1 257 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-201ENST00000293889 VHLLQ6RSH7 139 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 TMEM171Q8WVE6 324 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 DERL3Q96Q80 235 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 PPIL3Q9H2H8 161 aaKnown RBP15.25■□□□□ 0.03
CCDC78-201ENST00000293889 OPA3Q9H6K4 179 aa15.25■□□□□ 0.03
CCDC78-201ENST00000293889 ZNF275Q9NSD4 429 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-201ENST00000293889 FZR1Q9UM11 496 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms