RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 OR1M1Q8NGA1 313 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 RRNAD1Q96FB5 475 aaKnown RBP14.99□□□□□ -0.01
FOXA1-201ENST00000250448 TAAR9Q96RI9 348 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 CDC6Q99741 560 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 RNF126Q9BV68 326 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 MMP26Q9NRE1 261 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 EML6Q6ZMW3 1958 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 ZFAND5O76080 213 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 FOLR3P41439 243 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 RAB13P51153 203 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 MICBQ29980 383 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.99□□□□□ -0.01
FOXA1-201ENST00000250448 OR10G3Q8NGC4 313 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 TLNRD1Q9H1K6 362 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 TREM1Q9NP99 234 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 CENPMQ9NSP4 180 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 EXPH5Q8NEV8 1989 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 IL11P20809 199 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 RFC3P40938 356 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 CYCSP99999 105 aaKnown RBP14.99□□□□□ -0.01
FOXA1-201ENST00000250448 PCK2Q16822 640 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 DEGS2Q6QHC5 323 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 GRINAQ7Z429 371 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 OR10R2Q8NGX6 335 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 NUBPLQ8TB37 319 aa14.99□□□□□ -0.01
FOXA1-201ENST00000250448 GVINP1Q7Z2Y8 2422 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 A6NIZ1 184 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 H0YIZ8 118 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 ADAM10O14672 748 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 SNAPINO95295 136 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 RAP1BP61224 184 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 RAP1AP62834 184 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 OR4K15Q8NH41 348 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 ASB10Q8WXI3 467 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 ADAT3Q96EY9 351 aaPredicted RBP14.98□□□□□ -0.01
FOXA1-201ENST00000250448 TMEM231Q9H6L2 316 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 PTGES2Q9H7Z7 377 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 F12P00748 615 aaPredicted RBP14.98□□□□□ -0.01
FOXA1-201ENST00000250448 NPBWR1P48145 328 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 GPR119Q8TDV5 335 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 NUDT16L1Q9BRJ7 211 aaKnown RBP14.98□□□□□ -0.01
FOXA1-201ENST00000250448 FAM206AQ9NX38 181 aa14.98□□□□□ -0.01
FOXA1-201ENST00000250448 CEP250Q9BV73 2442 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 NPIPA5E9PKD4 350 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 GSK3AP49840 483 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 MMP16P51512 607 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 IL34Q6ZMJ4 242 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 ZNF248Q8NDW4 579 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 RNF133Q8WVZ7 376 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 RASL10BQ96S79 203 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 C12orf57Q99622 126 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 TCFL5Q9UL49 500 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 NPIPA1Q9UND3 350 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 SPTBN2O15020 2390 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 LOC102723996A0A087X1L8 192 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 SHISA8B8ZZ34 492 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 FTCDNL1E5RQL4 147 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 OR2T1O43869 369 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 TTRP02766 147 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 MST1LQ2TV78 715 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 AWAT2Q6E213 333 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 OR5L2Q8NGL0 311 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 SVIPQ8NHG7 77 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 ROBO4Q8WZ75 1007 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 LIN37Q96GY3 246 aaPredicted RBP14.97□□□□□ -0.01
FOXA1-201ENST00000250448 IMMP1LQ96LU5 166 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 SEC11CQ9BY50 192 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 ESRP2Q9H6T0 727 aaKnown RBP14.97□□□□□ -0.01
FOXA1-201ENST00000250448 BIN3Q9NQY0 253 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 KLRF1Q9NZS2 232 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 SLC5A6Q9Y289 635 aa14.97□□□□□ -0.01
FOXA1-201ENST00000250448 IGKV1D-43A0A0B4J1Z2 117 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 SYT7O43581 403 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 FAM157CP0CG43 387 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 SFTPCP11686 197 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 PJVKQ0ZLH3 352 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 PRAMEF20Q5VT98 475 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 PGAP1Q75T13 922 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 WDFY1Q8IWB7 410 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 OR13C9Q8NGT0 318 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 NICN1Q9BSH3 213 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 COL25A1Q9BXS0 654 aaPredicted RBP14.96□□□□□ -0.01
FOXA1-201ENST00000250448 UQCC1Q9NVA1 299 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 NSG1A0A0A6YYJ2 146 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 MSGN1A6NI15 193 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 TMEM14DPA8MWL7 114 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 TMEM128Q5BJH2 165 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 DRAM2Q6UX65 266 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 ZFP57Q9NU63 452 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 FBLN5Q9UBX5 448 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 VDAC3Q9Y277 283 aa14.96□□□□□ -0.01
FOXA1-201ENST00000250448 LOC400499M0QZD8 3231 aa14.96□□□□□ -0.02
FOXA1-201ENST00000250448 CCDC187A0A096LP49 1063 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 ZNF705EA8MWA4 302 aaPredicted RBP14.95□□□□□ -0.02
FOXA1-201ENST00000250448 ZNF585AQ6P3V2 769 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 PRSS54Q6PEW0 395 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 C5orf46Q6UWT4 87 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 PPP1R32Q7Z5V6 425 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 TERB2Q8NHR7 220 aa14.95□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM230Q96A57 120 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms