RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CFAP54Q96N23 3096 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 VPS13AQ96RL7 3174 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 CCSO14618 274 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 DUS4LO95620 317 aaKnown RBP19.24■□□□□ 0.67
RNF39-201ENST00000244360 PRF1P14222 555 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 GNB3P16520 340 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 OTX2P32243 289 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 HRH1P35367 487 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 RAC3P60763 192 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 RSPO1Q2MKA7 263 aaPredicted RBP19.24■□□□□ 0.67
RNF39-201ENST00000244360 ACTBL2Q562R1 376 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 GVQW1Q8N7I0 195 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 TMEM104Q8NE00 496 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 KCNE4Q8WWG9 221 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 NICN1Q9BSH3 213 aa19.24■□□□□ 0.67
RNF39-201ENST00000244360 TECTAO75443 2155 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 CDC14BO60729 498 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 P04436 131 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 ATP1B3P54709 279 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 SNTB1Q13884 538 aaKnown RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 PAN3Q58A45 887 aaKnown RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 UQCC3Q6UW78 93 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 C6orf15Q6UXA7 325 aaPredicted RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 CT55Q8WUE5 264 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 MS4A7Q9GZW8 240 aaPredicted RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 TAS2R3Q9NYW6 316 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 V9GYS6 101 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 KIAA1549Q9HCM3 1950 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 TEX46H3BTG2 121 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 HCKP08631 526 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 GSTP1P09211 210 aaKnown RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 THBS4P35443 961 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 MRPS34P82930 218 aaKnown RBP19.23■□□□□ 0.67
RNF39-201ENST00000244360 ECH1Q13011 328 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 GFOD2Q3B7J2 385 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 LRRC37A5PQ49AS3 106 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 OR52W1Q6IF63 320 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 SEC22AQ96IW7 307 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 ARPC5LQ9BPX5 153 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 ZPBPQ9BS86 351 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 ULBP2Q9BZM5 246 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 PIGMQ9H3S5 423 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 KCNK7Q9Y2U2 307 aa19.23■□□□□ 0.67
RNF39-201ENST00000244360 ZDBF2Q9HCK1 2354 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 OR5H15A6NDH6 313 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 LRRC3CA6NJW4 275 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 LIPCP11150 499 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 SLC22A6Q4U2R8 563 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 TIPARPQ7Z3E1 657 aaKnown RBP19.22■□□□□ 0.67
RNF39-201ENST00000244360 GGNQ86UU5 652 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 NAA40Q86UY6 237 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 CDC6Q99741 560 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 RBM24Q9BX46 236 aaKnown RBP19.22■□□□□ 0.67
RNF39-201ENST00000244360 WDR13Q9H1Z4 485 aa19.22■□□□□ 0.67
RNF39-201ENST00000244360 EFSO43281 561 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 APOC3P02656 99 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 ALDH3B1P43353 468 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 ZNF84P51523 738 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 SSPNQ14714 243 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 LPAL2Q16609 132 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 FAM27BQ5VT28 67 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 CRIP3Q6Q6R5 217 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 RTN4RL2Q86UN3 420 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 CCDC54Q8NEL0 328 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 FRYLO94915 3013 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 FAM25EA8MYX2 175 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 TOR1AO14656 332 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 DHRS3O75911 302 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 MPIG6BO95866 241 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 NAT1P18440 290 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 TCN2P20062 427 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 VAMP1P23763 118 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 CYCSP99999 105 aaKnown RBP19.21■□□□□ 0.67
RNF39-201ENST00000244360 PLAC9Q5JTB6 97 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 FAM74A1Q5RGS3 127 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 TCEAL6Q6IPX3 200 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 HOGA1Q86XE5 327 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 OR52H1Q8NGJ2 320 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 TCEAL3Q969E4 200 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 FBXW5Q969U6 566 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 TMEM59Q9BXS4 323 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 SDK2Q58EX2 2172 aa19.21■□□□□ 0.67
RNF39-201ENST00000244360 LOC100509620A0A075B734 347 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 DBX1A6NMT0 343 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 OR2AT4A6NND4 320 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 APOC1P02654 83 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 SERPINA7P05543 415 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 HIST1H1DP16402 221 aaKnown RBP19.2■□□□□ 0.66
RNF39-201ENST00000244360 PPIAP62937 165 aaKnown RBP19.2■□□□□ 0.66
RNF39-201ENST00000244360 ZNF528Q3MIS6 628 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 YRDCQ86U90 279 aaKnown RBP19.2■□□□□ 0.66
RNF39-201ENST00000244360 TMEM105Q8N8V8 129 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 OR4K15Q8NH41 348 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 RHBDD1Q8TEB9 315 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 NMES1Q9C002 83 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 WDFY3Q8IZQ1 3526 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 F5H5K5 113 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 ACER2Q5QJU3 275 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 VAX1Q5SQQ9 334 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 DTX1Q86Y01 620 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms