RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TPRA1Q86W33 373 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF442Q9H7R0 627 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 MRPL15Q9P015 296 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 COMMD3Q9UBI1 195 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 TFAP2AP05549 437 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 COL8A1P27658 744 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 SDC2P34741 201 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 GABRA2P47869 451 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 FDX2Q6P4F2 183 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 NUP37Q8NFH4 326 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 PPP1R35Q8TAP8 253 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF420Q8TAQ5 688 aaPredicted RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 DVL3Q92997 716 aaPredicted RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 SPACA5Q96QH8 159 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 CACNG6Q9BXT2 260 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF224Q9NZL3 707 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 ST6GALNAC2Q9UJ37 374 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 GMDSO60547 372 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 CRTAPO75718 401 aaPredicted RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 GOSR1O95249 250 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 THBDP07204 575 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 NAT2P11245 290 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 GP2P55259 537 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 NCS1P62166 190 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 PSG7Q13046 419 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 PCGF3Q3KNV8 242 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 NPDC1Q9NQX5 325 aaPredicted RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 CBLN4Q9NTU7 201 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 DMXL2Q8TDJ6 3036 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 A0A075B6Q4 140 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 HS3ST1O14792 307 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 HEXAP06865 529 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 MAGEB1P43366 347 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 FABP5Q01469 135 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 FBXW12Q6X9E4 464 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 UTS2BQ765I0 119 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF584Q8IVC4 421 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR13F1Q8NGS4 319 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR51F2Q8NH61 342 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 REPIN1Q9BWE0 567 aaKnown RBP9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR14J1Q9UGF5 321 aa9.57□□□□□ -0.88
TNFAIP3-201ENST00000237289 SHANK1Q9Y566 2161 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 J3QRE1 110 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ISG15P05161 165 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF35P13682 527 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ARSBP15848 533 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 SERPINA2P20848 420 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 MPV17P39210 176 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ATAD3CQ5T2N8 411 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 DEFB108BQ8NET1 73 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR10AC1Q8NH08 325 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ORAI1Q96D31 301 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 NEDD4LQ96PU5 975 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 MRPL37Q9BZE1 423 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 CHMP1AQ9HD42 196 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ING3Q9NXR8 418 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 MYEF2Q9P2K5 600 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 MRPS28Q9Y2Q9 187 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 MPIG6BO95866 241 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 SMIM18P0DKX4 95 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 GLRA1P23415 457 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF672Q499Z4 452 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ANKRD13BQ86YJ7 626 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 RPL3LQ92901 407 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 FOXJ3Q9UPW0 622 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 E9PQ18 207 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 PPIHO43447 177 aaKnown RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF780AO75290 641 aaPredicted RBP9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 PLAUP00749 431 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 PCMT1P22061 227 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ATP5J2P56134 94 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZBTB37Q5TC79 503 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 SLC25A26Q70HW3 274 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR5A2Q8NGI9 324 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR51A4Q8NGJ6 313 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 FREM2Q5SZK8 3169 aa9.56□□□□□ -0.88
TNFAIP3-201ENST00000237289 PRR32B1ATL7 298 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF44P15621 663 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 HTR2CP28335 458 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 MTNR1BP49286 362 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 HGFACQ04756 655 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 KCNJ8Q15842 424 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 ISOC1Q96CN7 298 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 SMURF1Q9HCE7 757 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 C1orf123Q9NWV4 160 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 SIRT4Q9Y6E7 314 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 DHRS7CA6NNS2 312 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 F5H5P2 479 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 C19orf84I3L1E1 186 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR14K1Q8NGZ2 314 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 C12orf43Q96C57 262 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 DERL3Q96Q80 235 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms