RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 IKZF1Q13422 519 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 BEX5Q5H9J7 111 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 ZFAND1Q8TCF1 268 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 PELI1Q96FA3 418 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 C7orf50Q9BRJ6 194 aaKnown RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
LINC00339-208ENST00000634934 RTTNQ86VV8 2226 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 DCHS2Q6V1P9 2916 aa12.48□□□□□ -0.41
LINC00339-208ENST00000634934 ABCD4O14678 606 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 SERPINA3P01011 423 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 ZNF35P13682 527 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 SLC6A1P30531 599 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-208ENST00000634934 DCTDP32321 178 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 WNT5AP41221 380 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 TGM4P49221 684 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 GZMKP49863 264 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
LINC00339-208ENST00000634934 MRPS15P82914 257 aaKnown RBP12.47□□□□□ -0.41
LINC00339-208ENST00000634934 MFGE8Q08431 387 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-208ENST00000634934 CARTPTQ16568 116 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 ARL9Q6T311 187 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 DRAM2Q6UX65 266 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 R4GMQ9 66 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 E9PI62 339 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 ATP6V1G2-DDX39BF2Z307 99 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 HPGDSO60760 199 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 TPPPO94811 219 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 PNPP00491 289 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 CD3EP07766 207 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 THBS2P35442 1172 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 TATDN3Q17R31 274 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 DMKNQ6E0U4 476 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-208ENST00000634934 PYHIN1Q6K0P9 492 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 ABHD4Q8TB40 342 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 HAVCR2Q8TDQ0 301 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 PGAM5Q96HS1 289 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 SPOCK3Q9BQ16 436 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 MMP28Q9H239 520 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 DIABLOQ9NR28 239 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 FAM206AQ9NX38 181 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 COPZ2Q9P299 210 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
LINC00339-208ENST00000634934 UNC79Q9P2D8 2635 aa12.46□□□□□ -0.41
LINC00339-208ENST00000634934 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 SHISA3A0PJX4 238 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 C7orf66A4D0T2 115 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 SIAH2O43255 324 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 NGFP01138 241 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 TALDO1P37837 337 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 MMP16P51512 607 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 NKX2-5P52952 324 aaPredicted RBP12.46□□□□□ -0.42
LINC00339-208ENST00000634934 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 ADAM5Q6NVV9 412 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 ACBD4Q8NC06 268 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 APOBEC3DQ96AK3 386 aaPredicted RBP12.46□□□□□ -0.42
LINC00339-208ENST00000634934 TMED9Q9BVK6 235 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 ABRACLQ9P1F3 81 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 OR52A1Q9UKL2 312 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 SPEF1Q9Y4P9 236 aa12.46□□□□□ -0.42
LINC00339-208ENST00000634934 C5orf63A6NC05 138 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 CTDSPLO15194 276 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 OGG1O15527 345 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 SRSF10O75494 262 aaKnown RBP12.45□□□□□ -0.42
LINC00339-208ENST00000634934 GATBO75879 557 aaKnown RBP12.45□□□□□ -0.42
LINC00339-208ENST00000634934 COX6B1P14854 86 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 RAD52P43351 418 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 UCP2P55851 309 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 RRAS2P62070 204 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-208ENST00000634934 MRPL28Q13084 256 aaKnown RBP12.45□□□□□ -0.42
LINC00339-208ENST00000634934 IL18Q14116 193 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 SNAI3Q3KNW1 292 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 PLA1AQ53H76 456 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 UNQ6126/PRO20091Q6UXV3 157 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 RFPL4BQ6ZWI9 263 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 CATSPERDQ86XM0 798 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 OR2G2Q8NGZ5 317 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 RPS4Y2Q8TD47 263 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms