RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ARID1AO14497 2285 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 IGHV3-64DA0A0J9YX35 117 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 INMTO95050 263 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 ACHEP22303 614 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 HNRNPA0Q13151 305 aaKnown RBP13□□□□□ -0.33
NEDD1-213ENST00000557644 NEDD8Q15843 81 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
NEDD1-213ENST00000557644 KCTD8Q6ZWB6 473 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 CYSLTR2Q9NS75 346 aa13□□□□□ -0.33
NEDD1-213ENST00000557644 ANKRD30BLA7E2S9 258 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 H7C417 338 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 RBMXP38159 391 aaKnown RBP12.99□□□□□ -0.33
NEDD1-213ENST00000557644 LIPAP38571 399 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 RPS11P62280 158 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEDD1-213ENST00000557644 MLLT11Q13015 90 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-213ENST00000557644 UBE2UQ5VVX9 321 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 CSNK2A3Q8NEV1 391 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 OR13G1Q8NGZ3 307 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 PIGCQ92535 297 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 ADAT3Q96EY9 351 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-213ENST00000557644 ELMOD3Q96FG2 381 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 CGGBP1Q9UFW8 167 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF281Q9Y2X9 895 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF850A8MQ14 1090 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 F5H5P2 479 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 NCR1O76036 304 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 DNASE1P24855 282 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 SOX2P48431 317 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 INSL4Q14641 139 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 ARMCX4Q5H9R4 360 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 CDH24Q86UP0 819 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 FGGYQ96C11 551 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 PERPQ96FX8 193 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 PLEKHA1Q9HB21 404 aa12.99□□□□□ -0.33
NEDD1-213ENST00000557644 A0A087WXM4 84 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF816-ZNF321PA0A0X1KG74 233 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 PSMB9P28065 219 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 PRDX4Q13162 271 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 OR8G1Q15617 311 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ZMAT1Q5H9K5 638 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 CEP78Q5JTW2 689 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 TSEN15Q8WW01 171 aaKnown RBP12.98□□□□□ -0.33
NEDD1-213ENST00000557644 UFD1Q92890 307 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM203Q969S6 136 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ADAT1Q9BUB4 502 aaKnown RBP12.98□□□□□ -0.33
NEDD1-213ENST00000557644 TMED9Q9BVK6 235 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF275Q9NSD4 429 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF701Q9NV72 531 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ENPP5Q9UJA9 477 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 CYSRT1A8MQ03 144 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 CST4P01036 141 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 HPXP02790 462 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 RPSAP08865 295 aaKnown RBP12.98□□□□□ -0.33
NEDD1-213ENST00000557644 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 CPEP16870 476 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 TPBGQ13641 420 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 PHC2Q8IXK0 858 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 FTMTQ8N4E7 242 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 GPR148Q8TDV2 347 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 ISYNA1Q9NPH2 558 aa12.98□□□□□ -0.33
NEDD1-213ENST00000557644 AKAP9Q99996 3911 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 ANKRD61A6NGH8 418 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 DHRS7CA6NNS2 312 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 GMDSO60547 372 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 MAB21L1Q13394 359 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 SSX1Q16384 188 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 DEFB113Q30KQ7 82 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 UBASH3BQ8TF42 649 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 ORAI1Q96D31 301 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 FGF23Q9GZV9 251 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-213ENST00000557644 RAB1BQ9H0U4 201 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 GPR173Q9NS66 373 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 DHDHQ9UQ10 334 aa12.97□□□□□ -0.33
NEDD1-213ENST00000557644 TPD52L2O43399 206 aaKnown RBP12.96□□□□□ -0.33
NEDD1-213ENST00000557644 OCM2P0CE71 109 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 GNALP38405 381 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 PTH2RP49190 550 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 ATP5J2P56134 94 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TNFAIP6P98066 277 aaPredicted RBP12.96□□□□□ -0.33
NEDD1-213ENST00000557644 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TMEM42Q69YG0 159 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 HPSE2Q8WWQ2 592 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 FCGR1BQ92637 280 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 ITPKCQ96DU7 683 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 OR14A2Q96R54 314 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 TREM2Q9NZC2 230 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 FBXO9Q9UK97 447 aaPredicted RBP12.96□□□□□ -0.33
NEDD1-213ENST00000557644 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 A0A1W2PPK0 400 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 NRASP01111 189 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 CD1AP06126 327 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 ADH4P08319 380 aa12.96□□□□□ -0.33
NEDD1-213ENST00000557644 ZNF12P17014 697 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms