RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SORCS2Q96PQ0 1159 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 CACNG6Q9BXT2 260 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 YTHDF1Q9BYJ9 559 aaKnown RBP5.51□□□□□ -1.53
CD44-214ENST00000525211 BCL2L14Q9BZR8 327 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 NIPAL2Q9H841 368 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 TREM2Q9NZC2 230 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 PCDHGB1Q9Y5G3 927 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 V9GYS6 101 aa5.51□□□□□ -1.53
CD44-214ENST00000525211 CREBBPQ92793 2442 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 IGKV1-27A0A075B6S5 117 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 IGKV1-9A0A0C4DH69 117 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TRBV5-5A0A0J9YX44 114 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 A0A0U1RQV5 110 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 A0A1B0GWJ7 208 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 SHISA3A0PJX4 238 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 IRGMA1A4Y4 181 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MAGEA13PA6NCF6 341 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 ACOD1A6NK06 481 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 F5H5P2 479 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TIMM8AO60220 97 aaPredicted RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 IGHV4-39P01824 125 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 HPXP02790 462 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TFF1P04155 84 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 HSMCR30P0CW71 290 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 RAC2P15153 192 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 ATP6V1B1P15313 513 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MYL12AP19105 171 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 CELP19835 753 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 CCL1P22362 96 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 CA6P23280 308 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 COL8A2P25067 703 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 THBS2P35442 1172 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TGFBR1P36897 503 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TGFBR2P37173 567 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TGM4P49221 684 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 RGS6P49758 472 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 GBX2P52951 348 aaPredicted RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 KLF3P57682 345 aaPredicted RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 ACTA2P62736 377 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 ACTG2P63267 376 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MAB21L1Q13394 359 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MED22Q15528 200 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MPPED2Q15777 294 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TBCEQ15813 527 aaPredicted RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 UBE2V2Q15819 145 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 NEDD8Q15843 81 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TSTQ16762 297 aaKnown RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 TIGD6Q17RP2 521 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 ZNF829Q3KNS6 432 aaPredicted RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 FAM201AQ5SY85 155 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 UBE2UQ5VVX9 321 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 PRAMEF6Q5VXH4 476 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 LIPKQ5VXJ0 399 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 ZNF544Q6NX49 715 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 PAMR1Q6UXH9 720 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 PGAP1Q75T13 922 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MRPL21Q7Z2W9 205 aaKnown RBP5.5□□□□□ -1.53
CD44-214ENST00000525211 KCTD20Q7Z5Y7 419 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 PHC2Q8IXK0 858 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 C11orf53Q8IXP5 236 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 FBXL14Q8N1E6 418 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TSPAN14Q8NG11 270 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 GHSRQ92847 366 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 YIPF5Q969M3 257 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TMEM203Q969S6 136 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 MUL1Q969V5 352 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 FGGYQ96C11 551 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 SLC30A2Q9BRI3 323 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 TMPRSS13Q9BYE2 586 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 OR10A2Q9H208 303 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 RNF167Q9H6Y7 350 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 GPR173Q9NS66 373 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 CBLN4Q9NTU7 201 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 SNX5Q9Y5X3 404 aa5.5□□□□□ -1.53
CD44-214ENST00000525211 C2CD3Q4AC94 2353 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 NOTCH2Q04721 2471 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 CHD3Q12873 2000 aaKnown RBP5.49□□□□□ -1.53
CD44-214ENST00000525211 TRAV8-7A0A075B6U6 113 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 TRBV5-7A0A0A0MS05 114 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 TRBV2A0A0J9YWF9 115 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 A0A1W2PPW3 197 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 MEGF11A6BM72 1044 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 GGT3PA6NGU5 568 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 ZNF850A8MQ14 1090 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 B9A039 149 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 WNT9BO14905 357 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 MYL12BO14950 172 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 XRCC2O43543 280 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 PLPP2O43688 288 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 TFAP2AP05549 437 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 TACSTD2P09758 323 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 CPEP16870 476 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 PAX7P23759 505 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 GCH1P30793 250 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 CCR9P51686 369 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 CCL8P80075 99 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 FABP5Q01469 135 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 ACSM1Q08AH1 577 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 PRDX4Q13162 271 aa5.49□□□□□ -1.53
CD44-214ENST00000525211 TPBGQ13641 420 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms