RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 NXPH4O95158 308 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 VAMP5O95183 116 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SOX14O95416 240 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CTDNEP1O95476 244 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC2A10O95528 541 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SEMA4FO95754 770 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CLDN1O95832 211 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A27O95847 323 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 C6orf47O95873 294 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PTTG1O95997 202 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HAND1O96004 215 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DHFRP00374 187 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NGFP01138 241 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OXTP01178 125 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGKV3-15P01624 115 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 P01737 135 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MT-ND4P03905 459 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 THY1P04216 161 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD74P04233 296 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCRBP04435 133 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TYMSP04818 313 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PCCAP05165 728 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 BCHEP06276 602 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CST2P09228 141 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GNAO1P09471 354 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR9G9P0C7N8 305 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L2P0CJ85 424 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L3P0CJ86 424 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L4P0CJ87 422 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L5P0CJ88 424 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L6P0CJ89 424 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUX4L7P0CJ90 424 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGA5P0DJD9 388 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CT45A10P0DMU9 189 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SCGB1A1P11684 91 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 IFI30P13284 250 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GTF2F2P13984 249 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 IDO1P14902 403 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD1DP15813 335 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 UGT2B7P16662 529 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF17P17021 662 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCP1P17987 556 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 NELFEP18615 380 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RCC1P18754 421 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATF1P18846 271 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATF6P18850 670 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GGT1P19440 569 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TCN2P20062 427 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ALOX5APP20292 161 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RAB3BP20337 219 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 FUT3P21217 361 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ME2P23368 584 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PSMA1P25786 263 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PAX6P26367 422 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 G0S2P27469 103 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GDF1P27539 372 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HTR1EP28566 365 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ADORA2BP29275 332 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERPINB1P30740 379 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ALDH3A1P30838 453 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HTR1FP30939 366 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CCR7P32248 378 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SHMT2P34897 504 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PFN2P35080 140 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RCVRNP35243 200 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 DRD3P35462 400 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GCKP35557 465 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TIMP3P35625 211 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERPINB5P36952 375 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 IFNGR2P38484 337 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MYCNOSP40205 109 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD79BP40259 229 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OPRL1P41146 370 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PPICP45877 212 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GABRA4P48169 554 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 HCAR3P49019 387 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TUFMP49411 452 aaKnown RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TTPAP49638 278 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GSK3BP49841 420 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SULT1A1P50225 295 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SULT1A2P50226 295 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 PPOXP50336 477 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ERFP50548 548 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 UBE2E1P51965 193 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 GTF2A1P52655 376 aaPredicted RBP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SUB1P53999 127 aaKnown RBP eCLIP0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 AQP5P55064 265 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 CDKN2DP55273 166 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 LIM2P55344 173 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 BIDP55957 195 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RAB25P57735 213 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10A3P58181 314 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR12D2P58182 307 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 MTPNP58546 118 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAS2R31P59538 309 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 ERVPABLB-1P60509 514 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPCS3P61009 180 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RAB5BP61020 215 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 RAP1BP61224 184 aa0.46□□□□□ -2.34
RNU4-54P-201ENST00000516428 LMO4P61968 165 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms