RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ZNF676	Q8N7Q3	588 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	TSPAN14	Q8NG11	270 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	OR5AK2	Q8NH90	309 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	TRMT61A	Q96FX7	289 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	MRPL48	Q96GC5	212 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	MGLL	Q99685	303 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	VRK1	Q99986	396 aa	Predicted RBP	12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	PPIL3	Q9H2H8	161 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	RGCC	Q9H4X1	137 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	SP140L	Q9H930	580 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	TRIM36	Q9NQ86	728 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	GPR173	Q9NS66	373 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	ZNF701	Q9NV72	531 aa	Predicted RBP	12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	TREM2	Q9NZC2	230 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	PIGL	Q9Y2B2	252 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	CSMD1	Q96PZ7	3565 aa		12.35	□□□□□ -0.43
MATR3-238	ENST00000512107	IGKV1-9	A0A0C4DH69	117 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	TRBV5-5	A0A0J9YX44	114 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107		A0A1B0GVI7	797 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	LOC390937	A0A1W2PQ73	354 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107		H7C417	338 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107		M0R233	179 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	MRPS14	O60783	128 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	TNFAIP8	O95379	198 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	UBC	P0CG48	685 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	COL8A2	P25067	703 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	THBS2	P35442	1172 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	LIPA	P38571	399 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	SOX2	P48431	317 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	PTH2R	P49190	550 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	SNRPD2	P62316	118 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	PRDX4	Q13162	271 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	MAB21L1	Q13394	359 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	TPBG	Q13641	420 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	NEDD8	Q15843	81 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	TMEM42	Q69YG0	159 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	ZNF367	Q7RTV3	350 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	SEMA6D	Q8NFY4	1073 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	OR2Z1	Q8NG97	314 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	PIGC	Q92535	297 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	YIPF5	Q969M3	257 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	FGGY	Q96C11	551 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	NR1H4	Q96RI1	486 aa	Predicted RBP	12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	DYNLRB1	Q9NP97	96 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	FAIM	Q9NVQ4	179 aa		12.34	□□□□□ -0.43
MATR3-238	ENST00000512107	TANC2	Q9HCD6	1990 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107		A0A1W2PPK0	400 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	TMEM212	A6NML5	194 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	CST4	P01036	141 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ATP6V1B1	P15313	513 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	CPE	P16870	476 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	CCL8	P80075	99 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	BDH1	Q02338	343 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	MLLT11	Q13015	90 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	MRPL28	Q13084	256 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	UBE2V2	Q15819	145 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ARMCX4	Q5H9R4	360 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	CEP78	Q5JTW2	689 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	FAM27D1	Q5T7N8	215 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	TMEM244	Q5VVB8	128 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	PRAMEF6	Q5VXH4	476 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	TMEM91	Q6ZNR0	172 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	CDH24	Q86UP0	819 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	PHC2	Q8IXK0	858 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	C11orf53	Q8IXP5	236 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ITLN1	Q8WWA0	313 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	MUL1	Q969V5	352 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	TMIGD2	Q96BF3	282 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ITPKC	Q96DU7	683 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ELMOD3	Q96FG2	381 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	PERP	Q96FX8	193 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	NKX3-1	Q99801	234 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	OPA3	Q9H6K4	179 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ISYNA1	Q9NPH2	558 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	TMEM100	Q9NV29	134 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	MRPL15	Q9P015	296 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	HHLA2	Q9UM44	414 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	ZNF281	Q9Y2X9	895 aa		12.33	□□□□□ -0.44
MATR3-238	ENST00000512107	IGKV1-27	A0A075B6S5	117 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	TRBV5-7	A0A0A0MS05	114 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	GMDS	O60547	372 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	CD1A	P06126	327 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	ADH4	P08319	380 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	PAX1	P15863	534 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	TGFBR2	P37173	567 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	MAP2K3	P46734	347 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	RIPPLY1	Q0D2K3	151 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	MPPED2	Q15777	294 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	DEFB113	Q30KQ7	82 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	UNQ9370/PRO34162	Q6UXP9	181 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	MOB3C	Q70IA8	216 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	OR5P3	Q8WZ94	311 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	TMEM203	Q969S6	136 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	MEGF10	Q96KG7	1140 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	OR14A2	Q96R54	314 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	ADAT1	Q9BUB4	502 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	TMED9	Q9BVK6	235 aa		12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	PAPOLG	Q9BWT3	736 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-238	ENST00000512107	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms