RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 GIFP27352 417 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 GDI2P50395 445 aaKnown RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 CAV3P56539 151 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF85Q03923 595 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 CARTPTQ16568 116 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 BAK1Q16611 211 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 ARL9Q6T311 187 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 UNQ6126/PRO20091Q6UXV3 157 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 VASH1Q7L8A9 365 aaPredicted RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 AKAP14Q86UN6 197 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 SDR9C7Q8NEX9 313 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 SYNPRQ8TBG9 265 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 UBASH3BQ8TF42 649 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 C11orf40Q8WZ69 217 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 FOXN4Q96NZ1 517 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 CNN2Q99439 309 aaKnown RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 EIF3KQ9UBQ5 218 aaKnown RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 DUSP13Q9UII6 198 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 GPR160Q9UJ42 338 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 FZR1Q9UM11 496 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 SIRT4Q9Y6E7 314 aaPredicted RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ARPC3O15145 178 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 COX5BP10606 129 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 CCNOP22674 350 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 MYL9P24844 172 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ALDH3B1P43353 468 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 KLF3P57682 345 aaPredicted RBP12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ACTA2P62736 377 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ACTG2P63267 376 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SCRN3Q0VDG4 424 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 GGTLC2Q14390 218 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 CHAC2Q8WUX2 184 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SNX18Q96RF0 628 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 OR51B6Q9H340 312 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SLCO1C1Q9NYB5 712 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 A0A1W2PQ09 198 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SLC16A7O60669 478 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 GYPBP06028 91 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 OR2T7P0C7T2 308 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 WNT5AP41221 380 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ERVS71-1P61550 626 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 ASAH1Q13510 395 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 GLB1L2Q8IW92 636 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 OR1J1Q8NGS3 322 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 OR2T27Q8NH04 317 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 BPESC1Q9GZL8 116 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 EMC7Q9NPA0 242 aa12.37□□□□□ -0.43
COL27A1-203ENST00000468565 HPGDSO60760 199 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 CRLF1O75462 422 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 NCR1O76036 304 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 CRABP1P29762 137 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 CDKN2AP42771 156 aaKnown RBP12.36□□□□□ -0.43
COL27A1-203ENST00000468565 LSM6P62312 80 aaKnown RBP12.36□□□□□ -0.43
COL27A1-203ENST00000468565 CD300CQ08708 224 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 INSL4Q14641 139 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 NKPD1Q17RQ9 610 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 DNM1P34Q6PK57 102 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 TPRA1Q86W33 373 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF101Q8IZC7 436 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 SYS1Q8N2H4 156 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 MS4A15Q8N5U1 240 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 ZMYND19Q96E35 227 aaPredicted RBP12.36□□□□□ -0.43
COL27A1-203ENST00000468565 YAE1D1Q9NRH1 226 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 TAAR3PQ9P1P4 343 aa12.36□□□□□ -0.43
COL27A1-203ENST00000468565 COA3Q9Y2R0 106 aaPredicted RBP12.36□□□□□ -0.43
COL27A1-203ENST00000468565 SHISA3A0PJX4 238 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 E9PI62 339 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 SERPINA3P01011 423 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 GZMKP49863 264 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 GBX2P52951 348 aaPredicted RBP12.35□□□□□ -0.43
COL27A1-203ENST00000468565 TPTEP56180 551 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 OR12D2P58182 307 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 SLC3A1Q07837 685 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
COL27A1-203ENST00000468565 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 NRARPQ7Z6K4 114 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 ABHD4Q8TB40 342 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 SNX33Q8WV41 574 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
COL27A1-203ENST00000468565 ABCA2Q9BZC7 2435 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 IGHV4-61A0A0C4DH41 118 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 C17orf100A8MU93 164 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 A8MV72 311 aaPredicted RBP12.35□□□□□ -0.43
COL27A1-203ENST00000468565 IGHV4-31P0DP07 118 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 NAT2P11245 290 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 PYCR1P32322 319 aa12.35□□□□□ -0.43
COL27A1-203ENST00000468565 MRPS11P82912 194 aaKnown RBP12.35□□□□□ -0.43
COL27A1-203ENST00000468565 RIN1Q13671 783 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms