RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ATP23Q9Y6H3 246 aa9.17□□□□□ -0.94
RTF1-202ENST00000462276 C5orf63A6NC05 138 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 ANKRD61A6NGH8 418 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 C19orf84I3L1E1 186 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 PIN1P1O15428 100 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 MAGEB3O15480 346 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 IL1AP01583 271 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 ALDOBP05062 364 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 RAB3AP20336 220 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 CALRP27797 417 aaKnown RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 APOBEC3AP31941 199 aaPredicted RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 SERPINF1P36955 418 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 SOX2P48431 317 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 FABP6P51161 128 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 EFNB3Q15768 340 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 C22orf42Q6IC83 251 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 ZNF529Q6P280 563 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 USP43Q70EL4 1123 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 NKAIN3Q8N8D7 197 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 DNAAF1Q8NEP3 725 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 OR56B2PQ8NGI1 322 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 OR13G1Q8NGZ3 307 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 OR10AC1Q8NH08 325 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 MRPL24Q96A35 216 aaKnown RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 SPSB1Q96BD6 273 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 FOXRED1Q96CU9 486 aaPredicted RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 ADAT3Q96EY9 351 aaPredicted RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 HIST1H2AAQ96QV6 131 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 DHRS9Q9BPW9 319 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 CENPOQ9BU64 300 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 TMEM100Q9NV29 134 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 PURGQ9UJV8 347 aaKnown RBP9.16□□□□□ -0.94
RTF1-202ENST00000462276 SLC7A11Q9UPY5 501 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 CADP27708 2225 aa9.16□□□□□ -0.94
RTF1-202ENST00000462276 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 A0A1B0GWJ7 208 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 PLSCR5A0PG75 271 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 FAM221AA4D161 298 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 TRIM64BA6NI03 449 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 ANXA2P2A6NMY6 339 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 A6NNC1 897 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 SULT1B1O43704 296 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 TIMM8AO60220 97 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 GMDSO60547 372 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 NRASP01111 189 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 OCMP0CE72 109 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 BMP4P12644 408 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 FAHP16930 419 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 IGFBP3P17936 291 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 ACKR3P25106 362 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 LOXP28300 417 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 HLXQ14774 488 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 CNN3Q15417 329 aaKnown RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 ZNF672Q499Z4 452 aaPredicted RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 SPATA46Q5T0L3 261 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 OR2T2Q6IF00 324 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 OR13C5Q8NGS8 318 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 RPL3LQ92901 407 aaKnown RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 PIK3IP1Q96FE7 263 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 DIRC2Q96SL1 478 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 OR51B6Q9H340 312 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 PLK3Q9H4B4 646 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 CISD1Q9NZ45 108 aaKnown RBP9.15□□□□□ -0.94
RTF1-202ENST00000462276 DUSP13Q9UII6 198 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 PTPN13Q12923 2485 aa9.15□□□□□ -0.94
RTF1-202ENST00000462276 OR5B21A6NL26 309 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 B9A039 149 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 E7EQL1 145 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 H3BMQ9 156 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 PYCARD-AS1I3L0S3 204 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 SIAH2O43255 324 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 OR4A8P0C604 315 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 RNF224P0DH78 156 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 CD37P11049 281 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 PRF1P14222 555 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 COX6B1P14854 86 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 ATF1P18846 271 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 BDKRB2P30411 391 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 FUT6P51993 359 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 CAPZA1P52907 286 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 VBP1P61758 197 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 SPOCK1Q08629 439 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 TNK1Q13470 666 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 INSL4Q14641 139 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 ADIPOQQ15848 244 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 CEACAM21Q3KPI0 293 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 FAM209AQ5JX71 171 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 GLT8D1Q68CQ7 371 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 SP5Q6BEB4 398 aaPredicted RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 ZDHHC23Q8IYP9 409 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 FBXL14Q8N1E6 418 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 OR1M1Q8NGA1 313 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 OR5A2Q8NGI9 324 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 C12orf43Q96C57 262 aaKnown RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 TRMT61AQ96FX7 289 aaKnown RBP9.14□□□□□ -0.95
RTF1-202ENST00000462276 SLC30A2Q9BRI3 323 aa9.14□□□□□ -0.95
RTF1-202ENST00000462276 UQCC2Q9BRT2 126 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms