RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 SBNO1A3KN83 1393 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR6C74A6NCV1 312 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF705GA8MUZ8 300 aaPredicted RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 GOLGA8TH3BQL2 631 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 M0R3G1 203 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 NME4O00746 187 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 BCKDKO14874 412 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 CASQ2O14958 399 aaPredicted RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 SIVA1O15304 175 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 B4GALT5O43286 388 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF207O43670 478 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 ABCC6O95255 1503 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 IGKV2D-28P01615 120 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 HBE1P02100 147 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 CTSLP07711 333 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 C4AP0C0L4 1744 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR8U9P0C7N5 309 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR56A5P0C7T3 313 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ERGP11308 486 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 RAB3AP20336 220 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 USF1P22415 310 aaPredicted RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 WARSP23381 471 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 IL32P24001 234 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 BMI1P35226 326 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 CACNG7P62955 275 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 PRR3P79522 188 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 PCM1Q15154 2024 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 RBMY1FQ15415 496 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 GABRA6Q16445 453 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 UBE2SQ16763 222 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 PGGHGQ32M88 737 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 TPTE2P1Q5T6R2 138 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 Q5W150 140 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 FBXW9Q5XUX1 488 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 FAM71E1Q6IPT2 247 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 NANOGP8Q6NSW7 305 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 WDFY1Q8IWB7 410 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF709Q8N972 641 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR11H7Q8NGC8 314 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR4K5Q8NGD3 323 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR5AR1Q8NGP9 310 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR6N1Q8NGY5 312 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR2L8Q8NGY9 312 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 CA5BP1Q8WTZ4 195 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 PEX13Q92968 403 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 NTAN1Q96AB6 310 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF707Q96C28 371 aaPredicted RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 FLYWCH2Q96CP2 140 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 SEH1LQ96EE3 360 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 NRBF2Q96F24 287 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 GALNT14Q96FL9 552 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF488Q96MN9 340 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF382Q96SR6 550 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OR52D1Q9H346 318 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 PIGUQ9H490 435 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZDBF2Q9HCK1 2354 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 PXMP2Q9NR77 195 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 MYEF2Q9P2K5 600 aaKnown RBP2.04□□□□□ -2.08
VPS41-207ENST00000439468 SLC17A7Q9P2U7 560 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 OPN4Q9UHM6 478 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 MYO15AQ9UKN7 3530 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 COMMD3-BMI1R4GMX3 469 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 ZNF292O60281 2723 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 GPR179Q6PRD1 2367 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
VPS41-207ENST00000439468 CACNA1SQ13698 1873 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 C4BP0C0L5 1744 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 E9PCH4 1651 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 COL4A5P29400 1685 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 ARHGEF10O15013 1369 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 LRPPRCP42704 1394 aaKnown RBP2.03□□□□□ -2.08
VPS41-207ENST00000439468 A0A0U1RQV1 116 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 TMEM223A0PJW6 202 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 LRCOL1A6NCL2 159 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 LRRIQ4A6NIV6 560 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 ZBTB5O15062 677 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
VPS41-207ENST00000439468 SCELO95171 688 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 KRT16P08779 473 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 LINC00869P0C866 280 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 CD37P11049 281 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 SFTPCP11686 197 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 PSMC3P17980 439 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 DTYMKP23919 212 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 SLC11A1P49279 550 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 NDUFA8P51970 172 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 NCF4Q15080 339 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 QPRTQ15274 297 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 IRF4Q15306 451 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 ABCA11PQ4W5N1 156 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 NKAIN4Q8IVV8 208 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 DEFB123Q8N688 67 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 LRRC75AQ8NAA5 344 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 OR51F2Q8NH61 342 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 CIRBP-AS1Q8TBR5 109 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 RGP1Q92546 391 aaPredicted RBP2.03□□□□□ -2.08
VPS41-207ENST00000439468 ESR2Q92731 530 aa2.03□□□□□ -2.08
VPS41-207ENST00000439468 PTX4Q96A99 478 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms