RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ANKRD30BLA7E2S9 258 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 TIMM8AO60220 97 aaPredicted RBP17.75■□□□□ 0.43
CHD3-204ENST00000439235 SERPINB10P48595 397 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 PSG7Q13046 419 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 FOXB2Q5VYV0 432 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 USP43Q70EL4 1123 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 UTS2BQ765I0 119 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 PIGTQ969N2 578 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 MRPL24Q96A35 216 aaKnown RBP17.75■□□□□ 0.43
CHD3-204ENST00000439235 HS3ST6Q96QI5 342 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 PAPOLGQ9BWT3 736 aaKnown RBP17.75■□□□□ 0.43
CHD3-204ENST00000439235 PPIL3Q9H2H8 161 aaKnown RBP17.75■□□□□ 0.43
CHD3-204ENST00000439235 NEK6Q9HC98 313 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 FZR1Q9UM11 496 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 A6NIN4 97 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 PDCD5O14737 125 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 CST4P01036 141 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 SRMP19623 302 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 RAB3AP20336 220 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 TMEM42Q69YG0 159 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 KRT74Q7RTS7 529 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 TPRA1Q86W33 373 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 OR5AS1Q8N127 324 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 BHLHE23Q8NDY6 225 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 OR13C9Q8NGT0 318 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 ORAI1Q96D31 301 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 TECTBQ96PL2 329 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 ABCB9Q9NP78 766 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 MRPL15Q9P015 296 aaKnown RBP17.74■□□□□ 0.43
CHD3-204ENST00000439235 DUSP13Q9UII6 198 aa17.74■□□□□ 0.43
CHD3-204ENST00000439235 MYO18BQ8IUG5 2567 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 IGLV3-9A0A075B6K5 115 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 TRAV8-7A0A075B6U6 113 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 SULT1B1O43704 296 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 CLDN1O95832 211 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 NRASP01111 189 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 IL1AP01583 271 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 IGHV3-13P01766 116 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 OCMP0CE72 109 aaPredicted RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 IGFBP3P17936 291 aaPredicted RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 TGFBR1P36897 503 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 CNN3Q15417 329 aaKnown RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 MOGQ16653 247 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 ZNF672Q499Z4 452 aaPredicted RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 OR1M1Q8NGA1 313 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 PIGCQ92535 297 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 SLC22A4Q9H015 551 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 DCSTAMPQ9H295 470 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 CGGBP1Q9UFW8 167 aaPredicted RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 NOP16Q9Y3C1 178 aaKnown RBP17.73■□□□□ 0.43
CHD3-204ENST00000439235 RHBDD3Q9Y3P4 386 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 MPC1Q9Y5U8 109 aa17.73■□□□□ 0.43
CHD3-204ENST00000439235 A1L4Q6 167 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 MEGF11A6BM72 1044 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 A6NNC1 897 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 E7EQL1 145 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 ALX3O95076 343 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 CDRT1O95170 752 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 PLAUP00749 431 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 ERCC1P07992 297 aaPredicted RBP17.72■□□□□ 0.43
CHD3-204ENST00000439235 OR4A8P0C604 315 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 PRDX4Q13162 271 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 SPCS2Q15005 226 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 ADIPOQQ15848 244 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 MSMPQ1L6U9 139 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 ASPHD2Q6ICH7 369 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 ZNF529Q6P280 563 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 LURAP1LQ8IV03 231 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 NKAIN3Q8N8D7 197 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 OR8G5Q8NG78 346 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 NDNFQ8TB73 568 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 UBASH3BQ8TF42 649 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 SYT3Q9BQG1 590 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 MRPL37Q9BZE1 423 aaKnown RBP17.72■□□□□ 0.43
CHD3-204ENST00000439235 TMEM138Q9NPI0 162 aa17.72■□□□□ 0.43
CHD3-204ENST00000439235 A0A1W2PPW3 197 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 GMDSO60547 372 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 COX6B1P14854 86 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 ATF1P18846 271 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 BDKRB2P30411 391 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 SDC2P34741 201 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 PLCXD3Q63HM9 321 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 LRRTM1Q86UE6 522 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 ZDHHC23Q8IYP9 409 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 SPSB1Q96BD6 273 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 DHRS9Q9BPW9 319 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 PLK3Q9H4B4 646 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 GPR173Q9NS66 373 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 CISD1Q9NZ45 108 aaKnown RBP17.71■□□□□ 0.43
CHD3-204ENST00000439235 GPR160Q9UJ42 338 aa17.71■□□□□ 0.43
CHD3-204ENST00000439235 UBR5O95071 2799 aaPredicted RBP17.71■□□□□ 0.43
CHD3-204ENST00000439235 SHISA3A0PJX4 238 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 ANXA2P2A6NMY6 339 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 ZNF850A8MQ14 1090 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 MAGEB3O15480 346 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 MAS1P04201 325 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 RAB3BP20337 219 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 PRKACBP22694 351 aa17.7■□□□□ 0.42
CHD3-204ENST00000439235 APOBEC3AP31941 199 aaPredicted RBP17.7■□□□□ 0.42
CHD3-204ENST00000439235 EVX1P49640 407 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms