RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CASTOR1Q8WTX7 329 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 SLC25A43Q8WUT9 341 aaPredicted RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 REG4Q9BYZ8 158 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 PLEKHA6Q9Y2H5 1048 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 SNAPC5O75971 98 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 RPA2P15927 270 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 VAMP1P23763 118 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 EIF1P41567 113 aaKnown RBP14.35□□□□□ -0.11
LITAF-201ENST00000339430 SLC35A1P78382 337 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 BEX5Q5H9J7 111 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 ZNF660Q6AZW8 331 aaPredicted RBP14.35□□□□□ -0.11
LITAF-201ENST00000339430 RGS7BPQ6MZT1 257 aaPredicted RBP14.35□□□□□ -0.11
LITAF-201ENST00000339430 LRRC18Q8N456 261 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 IL22RA1Q8N6P7 574 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 M1APQ8TC57 530 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 DHRS9Q9BPW9 319 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 MYOZ1Q9NP98 299 aaPredicted RBP14.35□□□□□ -0.11
LITAF-201ENST00000339430 SLC2A8Q9NY64 477 aa14.35□□□□□ -0.11
LITAF-201ENST00000339430 IFNA6P05013 189 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 ZBTB25P24278 435 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 PLAC9Q5JTB6 97 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 HDDC2Q7Z4H3 204 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 LYG2Q86SG7 212 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 SLC25A42Q86VD7 318 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 C1orf147Q96MC9 270 aaPredicted RBP14.34□□□□□ -0.11
LITAF-201ENST00000339430 ZNF385AQ96PM9 386 aaKnown RBP14.34□□□□□ -0.11
LITAF-201ENST00000339430 UCN2Q96RP3 112 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 IL17BQ9UHF5 180 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 CDRT15L2A8MXV6 281 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 F5H5K5 113 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 CRTAPO75718 401 aaPredicted RBP14.34□□□□□ -0.11
LITAF-201ENST00000339430 RLN2P04090 185 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 ADH6P28332 368 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 MPGP29372 298 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 CASRP41180 1078 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 SLC6A9P48067 706 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 IL13RA1P78552 427 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 TGIF1Q15583 401 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 KCTD9Q7L273 389 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 ZNF775Q96BV0 537 aaPredicted RBP14.34□□□□□ -0.11
LITAF-201ENST00000339430 PGAM5Q96HS1 289 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 LINC00052Q96N35 136 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 FN3KRPQ9HA64 309 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 P4HTMQ9NXG6 502 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 CELSR3Q9NYQ7 3312 aa14.34□□□□□ -0.11
LITAF-201ENST00000339430 IGKV1-9A0A0C4DH69 117 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 C9orf170A2RU37 121 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 OR5H15A6NDH6 313 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 TLX3O43711 291 aaPredicted RBP14.33□□□□□ -0.11
LITAF-201ENST00000339430 GFRA3O60609 400 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 CDC14BO60729 498 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 CSNK1A1P48729 337 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 SLC38A6Q8IZM9 456 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 RELL2Q8NC24 303 aaPredicted RBP14.33□□□□□ -0.11
LITAF-201ENST00000339430 OR4K15Q8NH41 348 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 MARCH1Q8TCQ1 289 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 RAB3CQ96E17 227 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 MICU1Q9BPX6 476 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 ASCL3Q9NQ33 180 aa14.33□□□□□ -0.11
LITAF-201ENST00000339430 CD8AP01732 235 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 ATP1B3P54709 279 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 PGAP1Q75T13 922 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 TMEM59Q9BXS4 323 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 COMMD9Q9P000 198 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 NUP50Q9UKX7 468 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 KCNMB2Q9Y691 235 aa14.33□□□□□ -0.12
LITAF-201ENST00000339430 PCSK5Q92824 1860 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 ASPMQ8IZT6 3477 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 MFSD2BA6NFX1 497 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 LGALS8O00214 317 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 RAD51DO75771 328 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 GUCA1AP43080 201 aaPredicted RBP14.32□□□□□ -0.12
LITAF-201ENST00000339430 TMEM50BP56557 158 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 Q0VFX4 171 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 DOK3Q7L591 496 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 GTPBP8Q8N3Z3 284 aaPredicted RBP14.32□□□□□ -0.12
LITAF-201ENST00000339430 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 OR6K3Q8NGY3 331 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 OR14K1Q8NGZ2 314 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 PPP1R1CQ8WVI7 109 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 ARHGAP5-AS1Q96IT6 56 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 LYZL4Q96KX0 146 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 RBM24Q9BX46 236 aaKnown RBP14.32□□□□□ -0.12
LITAF-201ENST00000339430 PROK2Q9HC23 129 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 HPP00738 406 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 CD82P27701 267 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 GRB2P62993 217 aaKnown RBP14.32□□□□□ -0.12
LITAF-201ENST00000339430 KCNMB1Q16558 191 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 MICBQ29980 383 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 OPN5Q6U736 354 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 SLC51BQ86UW2 128 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 ASB13Q8WXK3 278 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 DKKL1Q9UK85 242 aa14.32□□□□□ -0.12
LITAF-201ENST00000339430 NPIPA2E9PIF3 369 aa14.31□□□□□ -0.12
LITAF-201ENST00000339430 NPIPA3F8WFD2 350 aa14.31□□□□□ -0.12
LITAF-201ENST00000339430 KCNAB3O43448 404 aa14.31□□□□□ -0.12
LITAF-201ENST00000339430 SCGNO76038 276 aa14.31□□□□□ -0.12
LITAF-201ENST00000339430 CHRM2P08172 466 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms