RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	POP4	P38336	279 aa		5.05	□□□□□ -1.6
snR17b	snR17b	TSC10	P38342	320 aa		5.05	□□□□□ -1.6
snR17b	snR17b	UBP9	P39967	754 aa		5.05	□□□□□ -1.6
snR17b	snR17b	PRK1	P40494	810 aa		5.05	□□□□□ -1.6
snR17b	snR17b	DOT5	P40553	215 aa		5.05	□□□□□ -1.6
snR17b	snR17b	FIG4	P42837	879 aa		5.05	□□□□□ -1.6
snR17b	snR17b	NOP9	P47077	666 aa	Known RBP	5.05	□□□□□ -1.6
snR17b	snR17b	LIA1	P47120	325 aa	Known RBP	5.05	□□□□□ -1.6
snR17b	snR17b	COS5	P47187	383 aa		5.05	□□□□□ -1.6
snR17b	snR17b	YNL247W	P53852	767 aa	Known RBP	5.05	□□□□□ -1.6
snR17b	snR17b	FOX2	Q02207	900 aa	Known RBP	5.05	□□□□□ -1.6
snR17b	snR17b	SEN54	Q02825	467 aa	Predicted RBP	5.05	□□□□□ -1.6
snR17b	snR17b	ATG16	Q03818	150 aa		5.05	□□□□□ -1.6
snR17b	snR17b	RSM24	Q03976	319 aa		5.05	□□□□□ -1.6
snR17b	snR17b	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
snR17b	snR17b	RIX7	Q07844	837 aa	Known RBP	5.05	□□□□□ -1.6
snR17b	snR17b	KEL3	Q08979	651 aa	Predicted RBP	5.05	□□□□□ -1.6
snR17b	snR17b	YLR053C	Q12026	108 aa		5.05	□□□□□ -1.6
snR17b	snR17b	VIK1	Q12045	647 aa		5.05	□□□□□ -1.6
snR17b	snR17b	NFI1	Q12216	726 aa		5.05	□□□□□ -1.6
snR17b	snR17b	RRD2	Q12461	358 aa		5.05	□□□□□ -1.6
snR17b	snR17b	ILV1	P00927	576 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	RRT12	P25381	491 aa		5.04	□□□□□ -1.6
snR17b	snR17b	KAR4	P25583	335 aa		5.04	□□□□□ -1.6
snR17b	snR17b	MGT1	P26188	188 aa		5.04	□□□□□ -1.6
snR17b	snR17b	RPN2	P32565	945 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	NUP120	P35729	1037 aa		5.04	□□□□□ -1.6
snR17b	snR17b	SMF2	P38778	549 aa		5.04	□□□□□ -1.6
snR17b	snR17b	ARB1	P40024	610 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	ASG1	P40467	964 aa		5.04	□□□□□ -1.6
snR17b	snR17b	ULP2	P40537	1034 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	LCB2	P40970	561 aa		5.04	□□□□□ -1.6
snR17b	snR17b	DIM1	P41819	318 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	RSM26	P47141	266 aa		5.04	□□□□□ -1.6
snR17b	snR17b	VID30	P53076	958 aa		5.04	□□□□□ -1.6
snR17b	snR17b	UTP22	P53254	1237 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	DCP2	P53550	970 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	SQS1	P53866	767 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	KTR5	P53966	522 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	TIM11	P81449	96 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	TMA20	P89886	181 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	RAT1	Q02792	1006 aa	Known RBP	5.04	□□□□□ -1.6
snR17b	snR17b	YDR476C	Q03362	224 aa		5.04	□□□□□ -1.6
snR17b	snR17b	SYF1	Q04048	859 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	UFO1	Q04511	668 aa		5.04	□□□□□ -1.6
snR17b	snR17b	FUS2	Q05670	677 aa		5.04	□□□□□ -1.6
snR17b	snR17b	BCP1	Q06338	283 aa		5.04	□□□□□ -1.6
snR17b	snR17b	ADY3	Q07732	790 aa		5.04	□□□□□ -1.6
snR17b	snR17b	NOC3	Q07896	663 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	DIA2	Q08496	732 aa	Predicted RBP	5.04	□□□□□ -1.6
snR17b	snR17b	YOR389W	Q08912	624 aa		5.04	□□□□□ -1.6
snR17b	snR17b	YPR202W	Q08993	238 aa		5.04	□□□□□ -1.6
snR17b	snR17b	CDC33	P07260	213 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	SSC1	P0CS90	654 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	CHS2	P14180	963 aa		5.03	□□□□□ -1.6
snR17b	snR17b	RPL8A	P17076	256 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	AEP2	P22136	580 aa		5.03	□□□□□ -1.6
snR17b	snR17b	CNA1	P23287	553 aa		5.03	□□□□□ -1.6
snR17b	snR17b	SNT1	P25357	1226 aa		5.03	□□□□□ -1.6
snR17b	snR17b	SRO9	P25567	434 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	KRE2	P27809	442 aa		5.03	□□□□□ -1.6
snR17b	snR17b	ICL1	P28240	557 aa	Predicted RBP	5.03	□□□□□ -1.6
snR17b	snR17b	RAD14	P28519	371 aa		5.03	□□□□□ -1.6
snR17b	snR17b	CHS3	P29465	1165 aa		5.03	□□□□□ -1.6
snR17b	snR17b	BCK2	P33306	851 aa		5.03	□□□□□ -1.6
snR17b	snR17b	CUE2	P36075	443 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	TGL4	P36165	910 aa		5.03	□□□□□ -1.6
snR17b	snR17b	DUG2	P38149	878 aa		5.03	□□□□□ -1.6
snR17b	snR17b	SLM4	P38247	162 aa		5.03	□□□□□ -1.6
snR17b	snR17b	DIA4	P38705	446 aa	Predicted RBP	5.03	□□□□□ -1.6
snR17b	snR17b	STL1	P39932	569 aa		5.03	□□□□□ -1.6
snR17b	snR17b	YTA12	P40341	825 aa		5.03	□□□□□ -1.6
snR17b	snR17b	CAB2	P40506	365 aa		5.03	□□□□□ -1.6
snR17b	snR17b	MAM33	P40513	266 aa		5.03	□□□□□ -1.6
snR17b	snR17b	JJJ2	P46997	583 aa		5.03	□□□□□ -1.6
snR17b	snR17b	DAN4	P47179	1161 aa		5.03	□□□□□ -1.6
snR17b	snR17b	VMA10	P48836	114 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	PAN2	P53010	1115 aa	Predicted RBP	5.03	□□□□□ -1.6
snR17b	snR17b	YGR054W	P53235	642 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	YGR111W	P53265	400 aa		5.03	□□□□□ -1.6
snR17b	snR17b	YDR222W	Q04925	415 aa		5.03	□□□□□ -1.6
snR17b	snR17b	TSR2	Q06672	205 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	DBP10	Q12389	995 aa	Known RBP	5.03	□□□□□ -1.6
snR17b	snR17b	PCK1	P10963	549 aa		5.02	□□□□□ -1.61
snR17b	snR17b	ATR1	P13090	542 aa		5.02	□□□□□ -1.61
snR17b	snR17b	MSD1	P15179	658 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	VMA2	P16140	517 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	PDC5	P16467	563 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	RGR1	P19263	1082 aa		5.02	□□□□□ -1.61
snR17b	snR17b	SFL1	P20134	766 aa		5.02	□□□□□ -1.61
snR17b	snR17b	DBP5	P20449	482 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	CLB2	P24869	491 aa		5.02	□□□□□ -1.61
snR17b	snR17b	SIP2	P34164	415 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	TIF3	P34167	436 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	UTP11	P34247	250 aa	Predicted RBP	5.02	□□□□□ -1.61
snR17b	snR17b	SPC42	P36094	363 aa		5.02	□□□□□ -1.61
snR17b	snR17b	PDX3	P38075	228 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	ETP1	P38748	585 aa	Known RBP	5.02	□□□□□ -1.61
snR17b	snR17b	PEX18	P38855	283 aa		5.02	□□□□□ -1.61
snR17b	snR17b	NPT1	P39683	429 aa	Known RBP	5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms