RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	YNL320W	P42840	284 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	LAM5	P43560	674 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	PRY3	P47033	881 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	YJR039W	P47107	1121 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	MND1	P53102	219 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	YGL036W	P53185	909 aa	Predicted RBP	11.1	□□□□□ -0.63
HHO1	YPL127C	BRE5	P53741	515 aa	Known RBP	11.1	□□□□□ -0.63
HHO1	YPL127C	GPD1	Q00055	391 aa	Known RBP	11.1	□□□□□ -0.63
HHO1	YPL127C	UTP6	Q02354	440 aa	Known RBP	11.1	□□□□□ -0.63
HHO1	YPL127C	MUK1	Q02866	612 aa		11.1	□□□□□ -0.63
HHO1	YPL127C	RAD1	P06777	1100 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	TUB3	P09734	445 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	PRP9	P19736	530 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	EFB1	P32471	206 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	ECM32	P32644	1121 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	GYP6	P32806	458 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	DUR3	P33413	735 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	TIF5	P38431	405 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	YER186C	P40101	306 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	ZAP1	P47043	880 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	INP52	P50942	1183 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	NCS6	P53088	359 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	ALG11	P53954	548 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	CWC21	Q03375	135 aa	Known RBP	11.09	□□□□□ -0.63
HHO1	YPL127C	IVY1	Q04934	453 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	YLR455W	Q06188	304 aa		11.09	□□□□□ -0.63
HHO1	YPL127C	ECM2	P38241	364 aa	Known RBP	11.08	□□□□□ -0.64
HHO1	YPL127C	PCM1	P38628	557 aa	Known RBP	11.08	□□□□□ -0.64
HHO1	YPL127C	TMN3	P40071	706 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	SNZ3	P43545	298 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	NMD5	P46970	1048 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	SNZ2	P53824	298 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	OMS1	Q06668	471 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	YPR027C	Q12079	277 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	PCD1	Q12524	340 aa		11.08	□□□□□ -0.64
HHO1	YPL127C	PEP5	P12868	1029 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	GCD6	P32501	712 aa	Known RBP	11.07	□□□□□ -0.64
HHO1	YPL127C	MRP4	P32902	394 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	SEG2	P34250	1132 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	QNS1	P38795	714 aa	Known RBP	11.07	□□□□□ -0.64
HHO1	YPL127C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.07	□□□□□ -0.64	not detected
HHO1	YPL127C	YNL134C	P53912	376 aa	Known RBP	11.07	□□□□□ -0.64
HHO1	YPL127C	UFO1	Q04511	668 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	SFH1	Q06168	426 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	TRE1	Q08919	783 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	CTF3	Q12748	733 aa		11.07	□□□□□ -0.64
HHO1	YPL127C	JIP3	O13555	125 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	CHS1	P08004	1131 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	ADH4	P10127	382 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	TRX1	P22217	103 aa	Known RBP	11.06	□□□□□ -0.64
HHO1	YPL127C	YME1	P32795	747 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	KDX1	P36005	433 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	CBR1	P38626	284 aa	Known RBP	11.06	□□□□□ -0.64
HHO1	YPL127C	YMR134W	P40207	237 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	INA22	P40576	216 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	SAP185	P40856	1058 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	YJR079W	P47126	109 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	AZR1	P50080	613 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	NOG2	P53742	486 aa	Known RBP	11.06	□□□□□ -0.64
HHO1	YPL127C	CIR2	Q08822	631 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	PUS1	Q12211	544 aa	Known RBP	11.06	□□□□□ -0.64
HHO1	YPL127C	MDM20	Q12387	796 aa	Known RBP	11.06	□□□□□ -0.64
HHO1	YPL127C	YOR131C	Q12486	218 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	SEY1	Q99287	776 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	MOT1	P32333	1867 aa		11.06	□□□□□ -0.64
HHO1	YPL127C	PUT4	P15380	627 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	PLC1	P32383	869 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	RPC37	P36121	282 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	RGD1	P38339	666 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	MSG5	P38590	489 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	APM2	P38700	605 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	VPS41	P38959	992 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	LAA1	P39526	2014 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	GEM1	P39722	662 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	AFG3	P39925	761 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	SAP1	P39955	897 aa	Known RBP	11.05	□□□□□ -0.64
HHO1	YPL127C	YJR054W	P47114	497 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	YML6	P51998	286 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	DUS1	P53759	423 aa	Known RBP	11.05	□□□□□ -0.64
HHO1	YPL127C	YNL108C	P53929	270 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	MZM1	Q03429	123 aa	Predicted RBP	11.05	□□□□□ -0.64
HHO1	YPL127C	CDD1	Q06549	142 aa		11.05	□□□□□ -0.64
HHO1	YPL127C	YOR059C	Q08448	450 aa	Known RBP	11.05	□□□□□ -0.64
HHO1	YPL127C	ADE4	P04046	510 aa	Known RBP	11.04	□□□□□ -0.64
HHO1	YPL127C	YML002W	P0CF17	737 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	SPO16	P17122	198 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	VBA3	P25594	458 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	CYS3	P31373	394 aa	Known RBP	11.04	□□□□□ -0.64
HHO1	YPL127C	VBA5	P36172	582 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	YBL036C	P38197	257 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	SWC5	P38326	303 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	VHC1	P38329	1120 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	UBX7	P38349	436 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	PCA1	P38360	1216 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	SNU56	Q03782	492 aa	Known RBP	11.04	□□□□□ -0.64
HHO1	YPL127C	THI7	Q05998	598 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	KAP95	Q06142	861 aa	Known RBP	11.04	□□□□□ -0.64
HHO1	YPL127C	YOR223W	Q12015	292 aa		11.04	□□□□□ -0.64
HHO1	YPL127C	KAR3	P17119	729 aa		11.03	□□□□□ -0.64
HHO1	YPL127C	AEP2	P22136	580 aa		11.03	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms