RNA–Protein interactions for RNA: YOR116C

RPO31, Transcript of RNA polymerase III largest subunit C160, yeast

Gene RPO31, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO31	YOR116C	ULA1	Q12059	462 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	MET6	P05694	767 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	ADH4	P10127	382 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	ILV6	P25605	309 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	GSY2	P27472	705 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	YJL206C	P39529	758 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	FYV10	P40492	516 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	TRS130	Q03660	1102 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	NNT1	Q05874	261 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	RSC3	Q06639	885 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	RAD61	Q99359	647 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	RPS9A	O13516	197 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	RPL8A	P17076	256 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	VAN1	P23642	535 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	HIR2	P32480	875 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	MDL2	P33311	773 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	OTU2	P38747	307 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	LNP1	P38878	278 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	SET4	P42948	560 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	YGL108C	P53139	140 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	PKH3	Q03306	898 aa	Predicted RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	VTI1	Q04338	217 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	MLH2	Q07980	695 aa		3.97	□□□□□ -1.77
RPO31	YOR116C	MDM20	Q12387	796 aa	Known RBP	3.97	□□□□□ -1.77
RPO31	YOR116C	PMS1	P14242	873 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	RAM1	P22007	431 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	RDS1	P25611	832 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	KAR9	P32526	644 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	OAF3	P36023	863 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	CST26	P38226	397 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	EMP65	P40085	556 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	ESL1	P40456	1118 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	VID30	P53076	958 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	ARO80	Q04052	950 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	SHE9	Q04172	456 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	RGA2	Q06407	1009 aa		3.96	□□□□□ -1.77
RPO31	YOR116C	VIP1	Q06685	1146 aa	Known RBP	3.96	□□□□□ -1.77
RPO31	YOR116C	CUE5	Q08412	411 aa	Known RBP	3.96	□□□□□ -1.77
RPO31	YOR116C	DAL1	P32375	460 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	BCD1	P38772	366 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	RPN10	P38886	268 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	DIM1	P41819	318 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	CHA4	P43634	648 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	IWR1	Q07532	353 aa	Predicted RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	RSA1	Q08932	381 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	AIM41	Q12032	185 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	GNT1	Q12096	491 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	RPL24A	P04449	155 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	SSC1	P0CS90	654 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	NMT1	P14743	455 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	DBP3	P20447	523 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	RPT5	P33297	434 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	CSE1	P33307	960 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	KES1	P35844	434 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	MUD2	P36084	527 aa	Known RBP	3.96	□□□□□ -1.78
RPO31	YOR116C	UIP5	P36137	443 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	POA1	P38218	177 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	PSF2	P40359	213 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	MOG1	P47123	218 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
RPO31	YOR116C	MPS2	P53159	387 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	PUS6	P53294	404 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	ECM23	Q02710	187 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	GYP1	Q08484	637 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	ECM29	P38737	1868 aa		3.96	□□□□□ -1.78
RPO31	YOR116C	KSS1	P14681	368 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	MAG1	P22134	296 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	BUD2	P33314	1104 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	CPR5	P35176	225 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	MRPL36	P36531	177 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	RGD1	P38339	666 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	BZZ1	P38822	633 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	LSM1	P47017	172 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	NNF1	P47149	201 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	HFM1	P51979	1187 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	RTA1	P53047	317 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	YGR021W	P53212	290 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	WAR1	Q03631	944 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	RQC1	Q05468	723 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
RPO31	YOR116C	FRA1	Q07825	749 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	YEH2	Q07950	538 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	OSW2	Q12202	724 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	GFA1	P14742	717 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	KIP2	P28743	706 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	NGG1	P32494	702 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	NOP4	P37838	685 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	YHR020W	P38708	688 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	VPS45	P38932	577 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	RRD1	P40454	393 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	OPT1	P40897	799 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	SNX4	P47057	423 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	ZDS2	P54786	942 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	NHP10	Q03435	203 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	EFR3	Q03653	782 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	YMR018W	Q04364	514 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	NCA2	Q12374	616 aa		3.95	□□□□□ -1.78
RPO31	YOR116C	LEU1	P07264	779 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	KRS1	P15180	591 aa	Known RBP	3.95	□□□□□ -1.78
RPO31	YOR116C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms