RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C SEC15P22224 910 aa3.23□□□□□ -1.89
RPB11YOL005C PPS1P38148 807 aa3.23□□□□□ -1.89
RPB11YOL005C BCD1P38772 366 aa3.23□□□□□ -1.89
RPB11YOL005C ECM1P39715 212 aa3.23□□□□□ -1.89
RPB11YOL005C OAF1P39720 1047 aaPredicted RBP3.23□□□□□ -1.89
RPB11YOL005C YJR039WP47107 1121 aa3.23□□□□□ -1.89
RPB11YOL005C PTA1Q01329 785 aaPredicted RBP3.23□□□□□ -1.89
RPB11YOL005C ADY4Q05955 493 aa3.23□□□□□ -1.89
RPB11YOL005C PNS1Q12412 539 aa3.23□□□□□ -1.89
RPB11YOL005C RPS21BQ3E754 87 aaKnown RBP3.23□□□□□ -1.89
RPB11YOL005C ERG6P25087 383 aaKnown RBP3.22□□□□□ -1.89
RPB11YOL005C IMG2P25642 146 aaPredicted RBP3.22□□□□□ -1.89
RPB11YOL005C SEC65P29478 273 aa3.22□□□□□ -1.89
RPB11YOL005C AKL1P38080 1108 aaKnown RBP3.22□□□□□ -1.89
RPB11YOL005C FMO1P38866 432 aa3.22□□□□□ -1.89
RPB11YOL005C DUN1P39009 513 aa3.22□□□□□ -1.89
RPB11YOL005C MNN11P46985 422 aaKnown RBP3.22□□□□□ -1.89
RPB11YOL005C ECM9Q02202 377 aa3.22□□□□□ -1.89
RPB11YOL005C GSF2Q04697 403 aaKnown RBP3.22□□□□□ -1.89
RPB11YOL005C YLR407WQ06070 228 aa3.22□□□□□ -1.89
RPB11YOL005C VHS3Q08438 674 aa3.22□□□□□ -1.89
RPB11YOL005C DIA2Q08496 732 aaPredicted RBP3.22□□□□□ -1.89
RPB11YOL005C TMA17Q12513 150 aa3.22□□□□□ -1.89
RPB11YOL005C HRP1Q99383 534 aaKnown RBP3.22□□□□□ -1.89
RPB11YOL005C RPS9BP05755 195 aaKnown RBP3.21□□□□□ -1.9
RPB11YOL005C ERG20P08524 352 aaKnown RBP3.21□□□□□ -1.9
RPB11YOL005C GLN4P13188 809 aaKnown RBP3.21□□□□□ -1.9
RPB11YOL005C CBR1P38626 284 aaKnown RBP3.21□□□□□ -1.9
RPB11YOL005C PCL5P38794 229 aa3.21□□□□□ -1.9
RPB11YOL005C SFB3P38810 929 aa3.21□□□□□ -1.9
RPB11YOL005C REV7P38927 245 aa3.21□□□□□ -1.9
RPB11YOL005C CCT3P39077 534 aaKnown RBP3.21□□□□□ -1.9
RPB11YOL005C NUP60P39705 539 aa3.21□□□□□ -1.9
RPB11YOL005C HOS4P40480 1083 aa3.21□□□□□ -1.9
RPB11YOL005C DAS1P47005 663 aa3.21□□□□□ -1.9
RPB11YOL005C YJR120WP47157 116 aa3.21□□□□□ -1.9
RPB11YOL005C MUK1Q02866 612 aa3.21□□□□□ -1.9
RPB11YOL005C TRE2Q08693 809 aa3.21□□□□□ -1.9
RPB11YOL005C ATG11Q12527 1178 aa3.21□□□□□ -1.9
RPB11YOL005C RPS21AP0C0V8 87 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C SSB1P11484 613 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C DAL3P32459 195 aa3.2□□□□□ -1.9
RPB11YOL005C YKU70P32807 602 aa3.2□□□□□ -1.9
RPB11YOL005C DID4P36108 232 aa3.2□□□□□ -1.9
RPB11YOL005C LYS9P38999 446 aa3.2□□□□□ -1.9
RPB11YOL005C GET2P40056 285 aa3.2□□□□□ -1.9
RPB11YOL005C SSB2P40150 613 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C CCT5P40413 562 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C NOP9P47077 666 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C UBC11P52492 156 aa3.2□□□□□ -1.9
RPB11YOL005C NOP15P53927 220 aaPredicted RBP3.2□□□□□ -1.9
RPB11YOL005C TIM44Q01852 431 aa3.2□□□□□ -1.9
RPB11YOL005C VBA4Q04602 768 aaKnown RBP3.2□□□□□ -1.9
RPB11YOL005C RMP1Q12530 201 aa3.2□□□□□ -1.9
RPB11YOL005C RPS17AP02407 136 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C RPS17BP14127 136 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C FRS1P15624 595 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C HCA4P20448 770 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C EUG1P32474 517 aa3.19□□□□□ -1.9
RPB11YOL005C PET127P32606 800 aa3.19□□□□□ -1.9
RPB11YOL005C OAF3P36023 863 aa3.19□□□□□ -1.9
RPB11YOL005C HXT6P39003 570 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C HXT7P39004 570 aa3.19□□□□□ -1.9
RPB11YOL005C BEM4P39011 633 aa3.19□□□□□ -1.9
RPB11YOL005C FMP52P40008 231 aa3.19□□□□□ -1.9
RPB11YOL005C RSC8P43609 557 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C STB4P50104 949 aa3.19□□□□□ -1.9
RPB11YOL005C PAN2P53010 1115 aaPredicted RBP3.19□□□□□ -1.9
RPB11YOL005C FOL1P53848 824 aa3.19□□□□□ -1.9
RPB11YOL005C RGC1Q06108 1083 aaKnown RBP3.19□□□□□ -1.9
RPB11YOL005C YPS7Q06325 596 aa3.19□□□□□ -1.9
RPB11YOL005C VPS36Q06696 566 aa3.19□□□□□ -1.9
RPB11YOL005C YPR027CQ12079 277 aa3.19□□□□□ -1.9
RPB11YOL005C ACF2Q12168 779 aa3.19□□□□□ -1.9
RPB11YOL005C ZRT2Q12436 422 aa3.19□□□□□ -1.9
RPB11YOL005C YKL033W-AQ86ZR7 236 aa3.19□□□□□ -1.9
RPB11YOL005C SWI6P09959 803 aa3.18□□□□□ -1.9
RPB11YOL005C FAT1P38225 669 aa3.18□□□□□ -1.9
RPB11YOL005C HRB1P38922 454 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
RPB11YOL005C GID8P40208 455 aa3.18□□□□□ -1.9
RPB11YOL005C BAP3P41815 604 aa3.18□□□□□ -1.9
RPB11YOL005C UBA2P52488 636 aa3.18□□□□□ -1.9
RPB11YOL005C TEL2P53038 688 aa3.18□□□□□ -1.9
RPB11YOL005C CTF4Q01454 927 aa3.18□□□□□ -1.9
RPB11YOL005C OMS1Q06668 471 aa3.18□□□□□ -1.9
RPB11YOL005C HBT1Q07653 1046 aaKnown RBP3.18□□□□□ -1.9
RPB11YOL005C MCH5Q08777 521 aa3.18□□□□□ -1.9
RPB11YOL005C AEP2P22136 580 aa3.17□□□□□ -1.9
RPB11YOL005C PEX1P24004 1043 aa3.17□□□□□ -1.9
RPB11YOL005C KIN82P25341 720 aa3.17□□□□□ -1.9
RPB11YOL005C HIR1P32479 840 aa3.17□□□□□ -1.9
RPB11YOL005C TFC4P33339 1025 aa3.17□□□□□ -1.9
RPB11YOL005C PHO11P35842 467 aa3.17□□□□□ -1.9
RPB11YOL005C PHO12P38693 467 aa3.17□□□□□ -1.9
RPB11YOL005C YHL017WP38745 532 aa3.17□□□□□ -1.9
RPB11YOL005C CHS7P38843 316 aa3.17□□□□□ -1.9
RPB11YOL005C PEA2P40091 420 aa3.17□□□□□ -1.9
RPB11YOL005C PIG2P40187 538 aa3.17□□□□□ -1.9
RPB11YOL005C YIL077CP40508 320 aa3.17□□□□□ -1.9
RPB11YOL005C VID28P40547 921 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms