RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W DAL7P21826 554 aa7.78□□□□□ -1.16
HDA1YNL021W MSB3P48566 633 aaPredicted RBP7.78□□□□□ -1.16
HDA1YNL021W RBG2P53295 368 aaKnown RBP7.78□□□□□ -1.16
HDA1YNL021W NSE5Q03718 556 aa7.78□□□□□ -1.16
HDA1YNL021W LRS4Q04087 347 aaKnown RBP7.78□□□□□ -1.16
HDA1YNL021W CDC45Q08032 650 aa7.78□□□□□ -1.16
HDA1YNL021W TRM8Q12009 286 aa7.78□□□□□ -1.16
HDA1YNL021W YBR182C-AQ8TGU6 64 aa7.78□□□□□ -1.16
HDA1YNL021W NHA1Q99271 985 aa7.78□□□□□ -1.16
HDA1YNL021W MTF2P10849 440 aa7.78□□□□□ -1.16
HDA1YNL021W GUK1P15454 187 aaKnown RBP7.78□□□□□ -1.16
HDA1YNL021W CCZ1P38273 704 aa7.78□□□□□ -1.16
HDA1YNL021W YIL092WP40497 633 aa7.78□□□□□ -1.16
HDA1YNL021W MTC3P53077 123 aa7.78□□□□□ -1.16
HDA1YNL021W PTA1Q01329 785 aaPredicted RBP7.78□□□□□ -1.16
HDA1YNL021W ARP7Q12406 477 aa7.78□□□□□ -1.16
HDA1YNL021W CYB2P00175 591 aa7.77□□□□□ -1.17
HDA1YNL021W RPS24AP0CX31 135 aaKnown RBP7.77□□□□□ -1.17
HDA1YNL021W RPS24BP0CX32 135 aaKnown RBP7.77□□□□□ -1.17
HDA1YNL021W CDC26P14724 124 aa7.77□□□□□ -1.17
HDA1YNL021W KIP1P28742 1111 aa7.77□□□□□ -1.17
HDA1YNL021W YKR051WP36142 418 aa7.77□□□□□ -1.17
HDA1YNL021W HSL7P38274 827 aa7.77□□□□□ -1.17
HDA1YNL021W MAD3P47074 515 aa7.77□□□□□ -1.17
HDA1YNL021W RCF1Q03713 159 aa7.77□□□□□ -1.17
HDA1YNL021W ENT1Q12518 454 aa7.77□□□□□ -1.17
HDA1YNL021W HSH49Q99181 213 aaPredicted RBP7.77□□□□□ -1.17
HDA1YNL021W SNF2P22082 1703 aa7.77□□□□□ -1.17
HDA1YNL021W YHR202WP38887 602 aa7.76□□□□□ -1.17
HDA1YNL021W RAD26P40352 1085 aa7.76□□□□□ -1.17
HDA1YNL021W SBE2P42223 864 aaKnown RBP7.76□□□□□ -1.17
HDA1YNL021W RMD8P43620 662 aa7.76□□□□□ -1.17
HDA1YNL021W CCT8P47079 568 aaKnown RBP7.76□□□□□ -1.17
HDA1YNL021W UBP15P50101 1230 aa7.76□□□□□ -1.17
HDA1YNL021W NCE103P53615 221 aa7.76□□□□□ -1.17
HDA1YNL021W ERO1Q03103 563 aa7.76□□□□□ -1.17
HDA1YNL021W YDR286CQ05530 114 aa7.76□□□□□ -1.17
HDA1YNL021W YDL144CQ07589 356 aa7.76□□□□□ -1.17
HDA1YNL021W YPL260WQ08977 551 aa7.76□□□□□ -1.17
HDA1YNL021W RVB2Q12464 471 aaKnown RBP7.76□□□□□ -1.17
HDA1YNL021W AUS1Q08409 1394 aa7.76□□□□□ -1.17
HDA1YNL021W UGA3P26370 528 aa7.76□□□□□ -1.17
HDA1YNL021W SEC65P29478 273 aa7.76□□□□□ -1.17
HDA1YNL021W PRO1P32264 428 aa7.76□□□□□ -1.17
HDA1YNL021W PEX5P35056 612 aa7.76□□□□□ -1.17
HDA1YNL021W QNS1P38795 714 aaKnown RBP7.76□□□□□ -1.17
HDA1YNL021W YAR028WP39548 234 aa7.76□□□□□ -1.17
HDA1YNL021W YEL068CP39977 110 aa7.76□□□□□ -1.17
HDA1YNL021W HOS3Q02959 697 aaKnown RBP7.76□□□□□ -1.17
HDA1YNL021W YLR287CQ05881 355 aa7.76□□□□□ -1.17
HDA1YNL021W VID22Q05934 901 aa7.76□□□□□ -1.17
HDA1YNL021W RRG1Q12167 365 aaPredicted RBP7.76□□□□□ -1.17
HDA1YNL021W ADP1P25371 1049 aa7.75□□□□□ -1.17
HDA1YNL021W YCL049CP25577 312 aa7.75□□□□□ -1.17
HDA1YNL021W CYS3P31373 394 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W STE13P33894 931 aa7.75□□□□□ -1.17
HDA1YNL021W CAB3P36076 571 aa7.75□□□□□ -1.17
HDA1YNL021W LRP1P38801 184 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W YJR098CP47139 656 aa7.75□□□□□ -1.17
HDA1YNL021W GYP7P48365 746 aa7.75□□□□□ -1.17
HDA1YNL021W GSF2Q04697 403 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W Q0142Q9ZZW4 58 aa7.75□□□□□ -1.17
HDA1YNL021W ADH4P10127 382 aa7.75□□□□□ -1.17
HDA1YNL021W PHO3P24031 467 aa7.75□□□□□ -1.17
HDA1YNL021W CMK1P27466 446 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W SEG2P34250 1132 aa7.75□□□□□ -1.17
HDA1YNL021W APM3P38153 483 aa7.75□□□□□ -1.17
HDA1YNL021W RPN10P38886 268 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W GPB2P39717 880 aa7.75□□□□□ -1.17
HDA1YNL021W RTR1P40084 226 aaPredicted RBP7.75□□□□□ -1.17
HDA1YNL021W PUG1P40100 303 aa7.75□□□□□ -1.17
HDA1YNL021W SMK1P41808 388 aa7.75□□□□□ -1.17
HDA1YNL021W ALY2P47029 1046 aa7.75□□□□□ -1.17
HDA1YNL021W ARE2P53629 642 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W MRPL19P53875 158 aa7.75□□□□□ -1.17
HDA1YNL021W ALG6Q12001 544 aaKnown RBP7.75□□□□□ -1.17
HDA1YNL021W CWC2Q12046 339 aaPredicted RBP7.75□□□□□ -1.17
HDA1YNL021W XRS2P33301 854 aa7.74□□□□□ -1.17
HDA1YNL021W REI1P38344 393 aaPredicted RBP7.74□□□□□ -1.17
HDA1YNL021W CAJ1P39101 391 aa7.74□□□□□ -1.17
HDA1YNL021W MEP1P40260 492 aa7.74□□□□□ -1.17
HDA1YNL021W NEO1P40527 1151 aa7.74□□□□□ -1.17
HDA1YNL021W IRC5P43610 853 aa7.74□□□□□ -1.17
HDA1YNL021W VPS53P47061 822 aa7.74□□□□□ -1.17
HDA1YNL021W BNA2P47125 453 aa7.74□□□□□ -1.17
HDA1YNL021W GCV1P48015 400 aa7.74□□□□□ -1.17
HDA1YNL021W ARP4P80428 489 aa7.74□□□□□ -1.17
HDA1YNL021W SSL2Q00578 843 aa7.74□□□□□ -1.17
HDA1YNL021W ACM1Q08981 209 aa7.74□□□□□ -1.17
HDA1YNL021W TY4B-HP0C2J7 1802 aa7.74□□□□□ -1.17
HDA1YNL021W TY4B-JP47024 1803 aa7.74□□□□□ -1.17
HDA1YNL021W NFS1P25374 497 aa7.73□□□□□ -1.17
HDA1YNL021W KRR1P25586 316 aaPredicted RBP7.73□□□□□ -1.17
HDA1YNL021W DPH2P32461 534 aa7.73□□□□□ -1.17
HDA1YNL021W YKR078WP36158 585 aaKnown RBP7.73□□□□□ -1.17
HDA1YNL021W NIT3P49954 291 aa7.73□□□□□ -1.17
HDA1YNL021W RRP46P53256 223 aaPredicted RBP7.73□□□□□ -1.17
HDA1YNL021W UTP21Q06078 939 aaPredicted RBP7.73□□□□□ -1.17
HDA1YNL021W VHS3Q08438 674 aa7.73□□□□□ -1.17
HDA1YNL021W IFA38P38286 347 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms