RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C RPD3P32561 433 aa5.17□□□□□ -1.58
EAR1YMR171C MRPL10P36520 322 aa5.17□□□□□ -1.58
EAR1YMR171C UBP12P39538 1254 aa5.17□□□□□ -1.58
EAR1YMR171C MND2P40577 368 aa5.17□□□□□ -1.58
EAR1YMR171C HLJ1P48353 224 aa5.17□□□□□ -1.58
EAR1YMR171C MLC1P53141 149 aa5.17□□□□□ -1.58
EAR1YMR171C PLB2Q03674 706 aa5.17□□□□□ -1.58
EAR1YMR171C LRS4Q04087 347 aaKnown RBP5.17□□□□□ -1.58
EAR1YMR171C RPS9AO13516 197 aaKnown RBP5.16□□□□□ -1.58
EAR1YMR171C PCL2P25693 308 aa5.16□□□□□ -1.58
EAR1YMR171C PRP45P28004 379 aaPredicted RBP5.16□□□□□ -1.58
EAR1YMR171C LRG1P35688 1017 aa5.16□□□□□ -1.58
EAR1YMR171C DID4P36108 232 aa5.16□□□□□ -1.58
EAR1YMR171C AAP1P37898 856 aaKnown RBP5.16□□□□□ -1.58
EAR1YMR171C CCT5P40413 562 aaKnown RBP5.16□□□□□ -1.58
EAR1YMR171C SPO22P40511 975 aa5.16□□□□□ -1.58
EAR1YMR171C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
EAR1YMR171C HXT16P47185 567 aa5.16□□□□□ -1.58
EAR1YMR171C SNO2P53823 222 aa5.16□□□□□ -1.58
EAR1YMR171C YKR011CQ02209 353 aa5.16□□□□□ -1.58
EAR1YMR171C VPS30Q02948 557 aa5.16□□□□□ -1.58
EAR1YMR171C ROT1Q03691 256 aa5.16□□□□□ -1.58
EAR1YMR171C ALE1Q08548 619 aa5.16□□□□□ -1.58
EAR1YMR171C DFG16Q99234 619 aa5.16□□□□□ -1.58
EAR1YMR171C CYS3P31373 394 aaKnown RBP5.15□□□□□ -1.58
EAR1YMR171C TYE7P33122 291 aaPredicted RBP5.15□□□□□ -1.58
EAR1YMR171C PRX1P34227 261 aaKnown RBP5.15□□□□□ -1.58
EAR1YMR171C TCD1P38756 429 aa5.15□□□□□ -1.58
EAR1YMR171C STU2P46675 888 aa5.15□□□□□ -1.58
EAR1YMR171C SSL1Q04673 461 aaPredicted RBP5.15□□□□□ -1.58
EAR1YMR171C SGD1Q06132 899 aa5.15□□□□□ -1.58
EAR1YMR171C SPE1P08432 466 aa5.15□□□□□ -1.59
EAR1YMR171C ELM1P32801 640 aa5.15□□□□□ -1.59
EAR1YMR171C PSP2P50109 593 aaKnown RBP5.15□□□□□ -1.59
EAR1YMR171C SDA1P53313 767 aaKnown RBP5.15□□□□□ -1.59
EAR1YMR171C SNP1Q00916 300 aaPredicted RBP5.15□□□□□ -1.59
EAR1YMR171C THI73Q07904 523 aa5.15□□□□□ -1.59
EAR1YMR171C YBR182C-AQ8TGU6 64 aa5.15□□□□□ -1.59
EAR1YMR171C SWI1P09547 1314 aa5.14□□□□□ -1.59
EAR1YMR171C YRF1-3P0CX14 1859 aa5.14□□□□□ -1.59
EAR1YMR171C YRF1-7P0CX15 1859 aa5.14□□□□□ -1.59
EAR1YMR171C YRF1-6P53819 1859 aa5.14□□□□□ -1.59
EAR1YMR171C UTP10P42945 1769 aaKnown RBP5.14□□□□□ -1.59
EAR1YMR171C RSF2P46974 1380 aa5.14□□□□□ -1.59
EAR1YMR171C SFL1P20134 766 aa5.14□□□□□ -1.59
EAR1YMR171C YEL1P34225 687 aa5.14□□□□□ -1.59
EAR1YMR171C MPE1P35728 441 aaKnown RBP5.14□□□□□ -1.59
EAR1YMR171C POA1P38218 177 aa5.14□□□□□ -1.59
EAR1YMR171C YEN1P40028 759 aa5.14□□□□□ -1.59
EAR1YMR171C RLP7P40693 322 aaKnown RBP5.14□□□□□ -1.59
EAR1YMR171C ALY2P47029 1046 aa5.14□□□□□ -1.59
EAR1YMR171C YJR008WP47085 338 aa5.14□□□□□ -1.59
EAR1YMR171C GTF1P53260 183 aaPredicted RBP5.14□□□□□ -1.59
EAR1YMR171C MRPL22P53881 309 aa5.14□□□□□ -1.59
EAR1YMR171C ZDS2P54786 942 aa5.14□□□□□ -1.59
EAR1YMR171C TPO1Q07824 586 aa5.14□□□□□ -1.59
EAR1YMR171C PSK2Q08217 1101 aa5.14□□□□□ -1.59
EAR1YMR171C YOR352WQ08816 343 aa5.14□□□□□ -1.59
EAR1YMR171C RIM15P43565 1770 aa5.13□□□□□ -1.59
EAR1YMR171C SES1P07284 462 aaKnown RBP5.13□□□□□ -1.59
EAR1YMR171C HOG1P32485 435 aa5.13□□□□□ -1.59
EAR1YMR171C MAC1P35192 417 aa5.13□□□□□ -1.59
EAR1YMR171C LAM1P38851 1228 aa5.13□□□□□ -1.59
EAR1YMR171C MGS1P40151 587 aa5.13□□□□□ -1.59
EAR1YMR171C YIL108WP40483 696 aaKnown RBP5.13□□□□□ -1.59
EAR1YMR171C GCV2P49095 1034 aa5.13□□□□□ -1.59
EAR1YMR171C CTF18P49956 741 aa5.13□□□□□ -1.59
EAR1YMR171C YGL242CP53066 181 aa5.13□□□□□ -1.59
EAR1YMR171C MET13P53128 600 aa5.13□□□□□ -1.59
EAR1YMR171C MRPS35P53292 345 aa5.13□□□□□ -1.59
EAR1YMR171C ARP5P53946 755 aa5.13□□□□□ -1.59
EAR1YMR171C VPS64Q03944 604 aa5.13□□□□□ -1.59
EAR1YMR171C HAL9Q12180 1030 aa5.13□□□□□ -1.59
EAR1YMR171C YOR022CQ12204 715 aa5.13□□□□□ -1.59
EAR1YMR171C SUP35P05453 685 aaKnown RBP5.12□□□□□ -1.59
EAR1YMR171C LPD1P09624 499 aaKnown RBP5.12□□□□□ -1.59
EAR1YMR171C SAP190P36123 1033 aa5.12□□□□□ -1.59
EAR1YMR171C NPR3P38742 1146 aa5.12□□□□□ -1.59
EAR1YMR171C PMT3P47190 753 aa5.12□□□□□ -1.59
EAR1YMR171C PUS2P53167 370 aa5.12□□□□□ -1.59
EAR1YMR171C RMT2Q03305 412 aa5.12□□□□□ -1.59
EAR1YMR171C WHI4Q07655 649 aaKnown RBP5.12□□□□□ -1.59
EAR1YMR171C ADY3Q07732 790 aa5.12□□□□□ -1.59
EAR1YMR171C FAS2P19097 1887 aaKnown RBP5.12□□□□□ -1.59
EAR1YMR171C DIF1O13577 133 aa5.12□□□□□ -1.59
EAR1YMR171C PRC1P00729 532 aa5.12□□□□□ -1.59
EAR1YMR171C FBP1P09201 348 aa5.12□□□□□ -1.59
EAR1YMR171C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
EAR1YMR171C PCM1P38628 557 aaKnown RBP5.12□□□□□ -1.59
EAR1YMR171C MEF2P39677 819 aa5.12□□□□□ -1.59
EAR1YMR171C SHR5P41912 237 aa5.12□□□□□ -1.59
EAR1YMR171C ECL1P48235 211 aa5.12□□□□□ -1.59
EAR1YMR171C YGR237CP50089 785 aa5.12□□□□□ -1.59
EAR1YMR171C TIM50Q02776 476 aa5.12□□□□□ -1.59
EAR1YMR171C CPA2P03965 1118 aaKnown RBP5.11□□□□□ -1.59
EAR1YMR171C CDC6P09119 513 aa5.11□□□□□ -1.59
EAR1YMR171C FRS2P15625 503 aaKnown RBP5.11□□□□□ -1.59
EAR1YMR171C MIH1P23748 554 aa5.11□□□□□ -1.59
EAR1YMR171C MFT1P33441 392 aaKnown RBP5.11□□□□□ -1.59
EAR1YMR171C ATG19P35193 415 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms